4V4V
Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (AA) | 16S ribosomal RNA | polymer | 1488 | 482285.7 | 1 | Escherichia coli | ||
| 2 | B, C, D (AU, AV, AW) | tRNA | polymer | 76 | 24518.6 | 3 | Escherichia coli | ||
| 3 | E (AB) | 30S ribosomal subunit protein S2 | polymer | 236 | 26292.1 | 1 | UniProt (P0A7V0) Pfam (PF00318) | Escherichia coli | |
| 4 | F (AC) | 30S ribosomal subunit protein S3 | polymer | 206 | 23078.8 | 1 | UniProt (P0A7V3) Pfam (PF07650) Pfam (PF00189) | Escherichia coli | |
| 5 | G (AD) | 30S ribosomal subunit protein S4 | polymer | 204 | 23311.9 | 1 | UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479) | Escherichia coli | |
| 6 | H (AE) | 30S ribosomal subunit protein S5 | polymer | 148 | 15618.1 | 1 | UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) | Escherichia coli | |
| 7 | I (AF) | 30S ribosomal subunit protein S6 | polymer | 95 | 11181.9 | 1 | UniProt (P02358) Pfam (PF01250) | Escherichia coli | |
| 8 | J (AG) | 30S ribosomal subunit protein S7 | polymer | 137 | 15384.7 | 1 | UniProt (P02359) Pfam (PF00177) | Escherichia coli | |
| 9 | K (AH) | 30S ribosomal subunit protein S8 | polymer | 127 | 13857.2 | 1 | UniProt (P0A7W7) Pfam (PF00410) | Escherichia coli | |
| 10 | L (AI) | 30S ribosomal subunit protein S9 | polymer | 126 | 14440.8 | 1 | UniProt (P0A7X3) Pfam (PF00380) | Escherichia coli | |
| 11 | M (AJ) | 30S ribosomal subunit protein S10 | polymer | 96 | 10996.8 | 1 | UniProt (P0A7R5) Pfam (PF00338) | Escherichia coli | |
| 12 | N (AK) | 30S ribosomal subunit protein S11 | polymer | 116 | 12388.1 | 1 | UniProt (P0A7R9) Pfam (PF00411) | Escherichia coli | |
| 13 | O (AL) | 30S ribosomal subunit protein S12 | polymer | 101 | 11245.1 | 1 | UniProt (P0A7S3) Pfam (PF00164) | Escherichia coli | |
| 14 | P (AM) | 30S ribosomal subunit protein S13 | polymer | 115 | 12738.9 | 1 | UniProt (P0A7S9) Pfam (PF00416) | Escherichia coli | |
| 15 | Q (AN) | 30S ribosomal subunit protein S14 | polymer | 61 | 7117.4 | 1 | UniProt (P0AG59) Pfam (PF00253) | Escherichia coli | |
| 16 | R (AO) | 30S ribosomal subunit protein S15 | polymer | 86 | 9915.4 | 1 | UniProt (P0ADZ4) Pfam (PF00312) | Escherichia coli | |
| 17 | S (AP) | 30S ribosomal subunit protein S16 | polymer | 78 | 8822.1 | 1 | UniProt (P0A7T3) Pfam (PF00886) | Escherichia coli | |
| 18 | T (AQ) | 30S ribosomal subunit protein S17 | polymer | 79 | 9134.8 | 1 | UniProt (P0AG63) Pfam (PF00366) | Escherichia coli | |
| 19 | U (AR) | 30S ribosomal subunit protein S18 | polymer | 69 | 8178.5 | 1 | UniProt (P0A7T7) Pfam (PF01084) | Escherichia coli | |
| 20 | V (AS) | 30S ribosomal subunit protein S19 | polymer | 87 | 9865.5 | 1 | UniProt (P0A7U3) Pfam (PF00203) | Escherichia coli | |
| 21 | W (AT) | 30S ribosomal subunit protein S20 | polymer | 83 | 9278.9 | 1 | UniProt (P0A7U7) Pfam (PF01649) | Escherichia coli | |
| 22 | X (B0) | 23S ribosomal RNA | polymer | 2740 | 888503.5 | 1 | Escherichia coli | ||
| 23 | Y (B9) | 5S ribosomal RNA | polymer | 108 | 34916.8 | 1 | Escherichia coli | ||
| 24 | Z (B2) | 50S ribosomal protein L1 | polymer | 222 | 23591.3 | 1 | UniProt (P0A7L0) Pfam (PF00687) | Escherichia coli | |
| 25 | AA, BA (B3, B5) | 50S ribosomal protein L7/L12 | polymer | 119 | 12090.9 | 2 | UniProt (P0A7K2) Pfam (PF16320) Pfam (PF00542) | Escherichia coli | |
| 26 | CA (BA) | 50S ribosomal protein L2 | polymer | 227 | 24691.3 | 1 | UniProt (P60422) Pfam (PF00181) Pfam (PF03947) | Escherichia coli | |
| 27 | DA (BB) | 50S ribosomal protein L3 | polymer | 209 | 22277.5 | 1 | UniProt (P60438) Pfam (PF00297) | Escherichia coli | |
| 28 | EA (BC) | 50S ribosomal protein L4 | polymer | 198 | 21806.1 | 1 | UniProt (P60723) Pfam (PF00573) | Escherichia coli | |
| 29 | FA (BD) | 50S ribosomal protein L5 | polymer | 177 | 20131.3 | 1 | UniProt (P62399) Pfam (PF00281) Pfam (PF00673) | Escherichia coli | |
| 30 | GA (BE) | 50S ribosomal protein L6 | polymer | 167 | 17799.4 | 1 | UniProt (P0AG55) Pfam (PF00347) | Escherichia coli | |
| 31 | HA (BF) | 50S ribosomal protein L9 | polymer | 149 | 15789.0 | 1 | UniProt (P0A7R1) Pfam (PF01281) Pfam (PF03948) | Escherichia coli | |
| 32 | IA (BG) | 50S ribosomal protein L11 | polymer | 139 | 14577.0 | 1 | UniProt (P0A7J7) Pfam (PF03946) Pfam (PF00298) | Escherichia coli | |
| 33 | JA (BH) | 50S ribosomal protein L13 | polymer | 142 | 16050.6 | 1 | UniProt (P0AA10) Pfam (PF00572) | Escherichia coli | |
| 34 | KA (BI) | 50S ribosomal protein L14 | polymer | 122 | 13433.9 | 1 | UniProt (P0ADY3) Pfam (PF00238) | Escherichia coli | |
| 35 | LA (BJ) | 50S ribosomal protein L15 | polymer | 140 | 14477.8 | 1 | UniProt (P02413) Pfam (PF00828) | Escherichia coli | |
| 36 | MA (BK) | 50S ribosomal protein L16 | polymer | 131 | 14736.5 | 1 | UniProt (P0ADY7) Pfam (PF00252) | Escherichia coli | |
| 37 | NA (BL) | 50S ribosomal protein L17 | polymer | 114 | 12945.1 | 1 | UniProt (P0AG44) Pfam (PF01196) | Escherichia coli | |
| 38 | OA (BM) | 50S ribosomal protein L18 | polymer | 113 | 12273.1 | 1 | UniProt (P0C018) Pfam (PF00861) | Escherichia coli | |
| 39 | PA (BN) | 50S ribosomal protein L19 | polymer | 114 | 13028.1 | 1 | UniProt (P0A7K6) Pfam (PF01245) | Escherichia coli | |
| 40 | QA (BO) | 50S RIBOSOMAL PROTEIN L20 | polymer | 115 | 13254.7 | 1 | UniProt (P0A7L3) Pfam (PF00453) | Escherichia coli | |
| 41 | RA (BQ) | 50S ribosomal protein L22 | polymer | 106 | 11778.8 | 1 | UniProt (P61175) Pfam (PF00237) | Escherichia coli | |
| 42 | SA (BR) | 50S ribosomal protein L23 | polymer | 92 | 10205.0 | 1 | UniProt (P0ADZ0) Pfam (PF00276) | Escherichia coli | |
| 43 | TA (BS) | 50S ribosomal protein L24 | polymer | 99 | 10823.6 | 1 | UniProt (P60624) Pfam (PF00467) Pfam (PF17136) | Escherichia coli | |
| 44 | UA (BT) | 50S ribosomal protein L25 | polymer | 94 | 10713.5 | 1 | UniProt (P68919) Pfam (PF01386) | Escherichia coli | |
| 45 | VA (BU) | 50S ribosomal protein L27 | polymer | 84 | 9015.3 | 1 | UniProt (P0A7L8) Pfam (PF01016) | Escherichia coli | |
| 46 | WA (BW) | 50S ribosomal protein L29 | polymer | 60 | 7087.3 | 1 | UniProt (P0A7M6) Pfam (PF00831) | Escherichia coli | |
| 47 | XA (BX) | 50S ribosomal protein L30 | polymer | 56 | 6223.4 | 1 | UniProt (P0AG51) Pfam (PF00327) | Escherichia coli | |
| 48 | YA (BZ) | 50S ribosomal protein L32 | polymer | 29 | 3317.8 | 1 | UniProt (P0A7N4) Pfam (PF01783) | Escherichia coli | |
| 49 | ZA (B1) | 50S ribosomal protein L33 | polymer | 52 | 6015.1 | 1 | UniProt (P0A7N9) Pfam (PF00471) | Escherichia coli |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 52 |
| Total formula weight | 2102332.4 | |
| All* | Total formula weight | 2102332.4 |
