4V48
Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A0) | 23S ribosomal RNA | polymer | 2904 | 941612.4 | 1 | EMBL (2073407) | Escherichia coli | |
| 2 | B (A9) | 5S ribosomal RNA | polymer | 120 | 38790.1 | 1 | EMBL (42753) | Escherichia coli | |
| 3 | C (A6) | tRNA-PHE | polymer | 76 | 24518.6 | 1 | Escherichia coli | ||
| 4 | D (AA) | 50S ribosomal protein L2 | polymer | 272 | 29792.4 | 1 | UniProt (P60422) Pfam (PF00181) Pfam (PF03947) | Escherichia coli | |
| 5 | E (AB) | 50S ribosomal protein L3 | polymer | 209 | 22277.5 | 1 | UniProt (P60438) Pfam (PF00297) | Escherichia coli | |
| 6 | F (AC) | 50S ribosomal protein L4 | polymer | 201 | 22121.6 | 1 | UniProt (P60723) Pfam (PF00573) | Escherichia coli | |
| 7 | G (AD) | 50S ribosomal protein L5 | polymer | 178 | 20202.4 | 1 | UniProt (P62399) Pfam (PF00281) Pfam (PF00673) | Escherichia coli | |
| 8 | H (AE) | 50S ribosomal protein L6 | polymer | 176 | 18801.6 | 1 | UniProt (P02390) | Escherichia coli | |
| 9 | I (AF) | 50S ribosomal protein L9 | polymer | 149 | 15789.0 | 1 | UniProt (P0A7R1) Pfam (PF03948) Pfam (PF01281) | Escherichia coli | |
| 10 | J (AG) | 50S ribosomal protein L11 | polymer | 141 | 14763.2 | 1 | UniProt (P0A7J7) Pfam (PF03946) Pfam (PF00298) | Escherichia coli | |
| 11 | K (AH) | 50S ribosomal protein L13 | polymer | 142 | 16050.6 | 1 | UniProt (P0AA10) Pfam (PF00572) | Escherichia coli | |
| 12 | L (AI) | 50S ribosomal protein L14 | polymer | 123 | 13565.1 | 1 | UniProt (P02411) | Escherichia coli | |
| 13 | M (AJ) | 50S ribosomal protein L15 | polymer | 144 | 15008.5 | 1 | UniProt (P02413) Pfam (PF00828) | Escherichia coli | |
| 14 | N (AK) | 50S ribosomal protein L16 | polymer | 136 | 15312.3 | 1 | UniProt (P02414) | Escherichia coli | |
| 15 | O (AL) | 50S ribosomal protein L17 | polymer | 127 | 14393.7 | 1 | UniProt (P02416) | Escherichia coli | |
| 16 | P (AM) | 50S ribosomal protein L18 | polymer | 117 | 12794.7 | 1 | UniProt (P0C018) Pfam (PF00861) | Escherichia coli | |
| 17 | Q (AN) | 50S ribosomal protein L19 | polymer | 114 | 13028.1 | 1 | UniProt (P0A7K6) Pfam (PF01245) | Escherichia coli | |
| 18 | R (AO) | 50S ribosomal protein L20 | polymer | 117 | 13396.8 | 1 | UniProt (P0A7L3) Pfam (PF00453) | Escherichia coli | |
| 19 | S (AQ) | 50S ribosomal protein L22 | polymer | 110 | 12253.4 | 1 | UniProt (P61175) Pfam (PF00237) | Escherichia coli | |
| 20 | T (AR) | 50S ribosomal protein L23 | polymer | 100 | 11222.2 | 1 | UniProt (P02424) | Escherichia coli | |
| 21 | U (AS) | 50S ribosomal protein L24 | polymer | 103 | 11208.1 | 1 | UniProt (P60624) Pfam (PF00467) Pfam (PF17136) | Escherichia coli | |
| 22 | V (AT) | 50S ribosomal protein L25 | polymer | 94 | 10713.5 | 1 | UniProt (P68919) Pfam (PF01386) | Escherichia coli | |
| 23 | W (AU) | 50S ribosomal protein L27 | polymer | 84 | 9015.3 | 1 | UniProt (P0A7L8) Pfam (PF01016) | Escherichia coli | |
| 24 | X (AW) | 50S ribosomal protein L29 | polymer | 63 | 7286.5 | 1 | UniProt (P0A7M6) Pfam (PF00831) | Escherichia coli | |
| 25 | Y (AX) | 50S ribosomal protein L30 | polymer | 58 | 6423.6 | 1 | UniProt (P02430) | Escherichia coli | |
| 26 | Z (AZ) | 50S ribosomal protein L32 | polymer | 56 | 6332.2 | 1 | UniProt (P0A7N4) Pfam (PF01783) | Escherichia coli | |
| 27 | AA (A1) | 50S ribosomal protein L33 | polymer | 54 | 6257.4 | 1 | UniProt (P0A7N9) Pfam (PF00471) | Escherichia coli | |
| 28 | BA (A4) | 50S ribosomal protein L36 | polymer | 38 | 4377.4 | 1 | UniProt (P0A7Q6) Pfam (PF00444) | Escherichia coli | |
| 29 | CA (BA) | 16S RIBOSOMAL RNA | polymer | 1543 | 499995.2 | 1 | EMBL (V00348) | Escherichia coli | |
| 30 | DA (BB) | 30S RIBOSOMAL PROTEIN S2 | polymer | 240 | 26650.5 | 1 | UniProt (P02351) | Escherichia coli | |
| 31 | EA (BC) | 30S RIBOSOMAL PROTEIN S3 | polymer | 232 | 25900.1 | 1 | UniProt (P02352) | Escherichia coli | |
| 32 | FA (BD) | 30S RIBOSOMAL PROTEIN S4 | polymer | 205 | 23383.0 | 1 | UniProt (P02354) | Escherichia coli | |
| 33 | GA (BE) | 30S RIBOSOMAL PROTEIN S5 | polymer | 166 | 17498.2 | 1 | UniProt (P02356) | Escherichia coli | |
| 34 | HA (BF) | 30S RIBOSOMAL PROTEIN S6 | polymer | 135 | 15727.5 | 1 | UniProt (P02358) Pfam (PF01250) | Escherichia coli | |
| 35 | IA (BG) | 30S RIBOSOMAL PROTEIN S7 | polymer | 178 | 19924.0 | 1 | UniProt (P02359) Pfam (PF00177) | Escherichia coli | |
| 36 | JA (BH) | 30S RIBOSOMAL PROTEIN S8 | polymer | 129 | 14015.4 | 1 | UniProt (P02361) | Escherichia coli | |
| 37 | KA (BI) | 30S RIBOSOMAL PROTEIN S9 | polymer | 129 | 14755.1 | 1 | UniProt (P02363) | Escherichia coli | |
| 38 | LA (BJ) | 30S RIBOSOMAL PROTEIN S10 | polymer | 103 | 11755.6 | 1 | UniProt (P02364) | Escherichia coli | |
| 39 | MA (BK) | 30S RIBOSOMAL PROTEIN S11 | polymer | 128 | 13739.8 | 1 | UniProt (P02366) | Escherichia coli | |
| 40 | NA (BL) | 30S RIBOSOMAL PROTEIN S12 | polymer | 123 | 13637.0 | 1 | UniProt (P02367) | Escherichia coli | |
| 41 | OA (BM) | 30S RIBOSOMAL PROTEIN S13 | polymer | 117 | 12997.3 | 1 | UniProt (P02369) | Escherichia coli | |
| 42 | PA (BN) | 30S RIBOSOMAL PROTEIN S14 | polymer | 100 | 11475.4 | 1 | UniProt (P02370) | Escherichia coli | |
| 43 | QA (BO) | 30S RIBOSOMAL PROTEIN S15 | polymer | 88 | 10159.6 | 1 | UniProt (P02371) | Escherichia coli | |
| 44 | RA (BP) | 30S RIBOSOMAL PROTEIN S16 | polymer | 82 | 9207.6 | 1 | UniProt (P02372) | Escherichia coli | |
| 45 | SA (BQ) | 30S RIBOSOMAL PROTEIN S17 | polymer | 83 | 9593.3 | 1 | UniProt (P02373) | Escherichia coli | |
| 46 | TA (BR) | 30S RIBOSOMAL PROTEIN S18 | polymer | 74 | 8874.3 | 1 | UniProt (P02374) | Escherichia coli | |
| 47 | UA (BS) | 30S RIBOSOMAL PROTEIN S19 | polymer | 91 | 10324.2 | 1 | UniProt (P02375) | Escherichia coli | |
| 48 | VA (BT) | 30S RIBOSOMAL PROTEIN S20 | polymer | 86 | 9577.3 | 1 | UniProt (P02378) | Escherichia coli |
Sequence modifications
BA: 1 - 1542 (EMBL: V00348)
| PDB | External Database | Details |
|---|---|---|
| C 1246 | - | insertion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 48 |
| Total formula weight | 2126498.0 | |
| All* | Total formula weight | 2126498.0 |
