Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4V2W

JMJD2A COMPLEXED WITH NI(II), NOG AND HISTONE H3K27me3 PEPTIDE (16-35)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
LYSINE-SPECIFIC DEMETHYLASE 4Apolymer38144326.32UniProt (O75164)
Pfam (PF02375)
Pfam (PF02373)
HOMO SAPIENS (HUMAN)JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 3A, JUMONJI DOMAIN-CONTAINING PROTEIN 2A
2C
(C)
HISTONE H3.1Tpolymer202055.41UniProt (Q16695)HOMO SAPIENS (HUMAN)
3D, I
(A, B)
NICKEL (II) IONnon-polymer58.72Chemie (NI)
4E, J
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
5F, K
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
6G, L
(A, B)
N-OXALYLGLYCINEnon-polymer147.12Chemie (OGA)
7H
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
8M, N
(A, B)
waterwater18.0500Chemie (HOH)
Sequence modifications
A, B: 1 - 359 (UniProt: O75164)
PDBExternal DatabaseDetails
Met -21-expression tag
His -20-expression tag
His -19-expression tag
His -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
Ser -14-expression tag
Ser -13-expression tag
Gly -12-expression tag
Val -11-expression tag
Asp -10-expression tag
Leu -9-expression tag
Gly -8-expression tag
Thr -7-expression tag
Glu -6-expression tag
Asn -5-expression tag
Leu -4-expression tag
Tyr -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight90708.0
Non-Polymers*Number of molecules9
Total formula weight705.4
All*Total formula weight91413.4
*Water molecules are not included.

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon