4UY8
Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (0) | 50S RIBOSOMAL PROTEIN L32 | polymer | 56 | 6332.2 | 1 | UniProt (U5SG25) Pfam (PF01783) UniProt (by SIFTS) (P0A7N4) | ESCHERICHIA COLI | |
| 2 | B (1) | 50S RIBOSOMAL PROTEIN L33 | polymer | 50 | 5814.8 | 1 | UniProt (U5SML7) Pfam (PF00471) UniProt (by SIFTS) (P0A7N9) | ESCHERICHIA COLI | |
| 3 | C (2) | 50S RIBOSOMAL PROTEIN L34 | polymer | 46 | 5397.5 | 1 | UniProt (P0A7P5) Pfam (PF00468) | ESCHERICHIA COLI | |
| 4 | D (3) | 50S RIBOSOMAL PROTEIN L35 | polymer | 64 | 7181.8 | 1 | UniProt (W0KX84) Pfam (PF01632) UniProt (by SIFTS) (P0A7Q1) | ESCHERICHIA COLI | |
| 5 | E (4) | 50S RIBOSOMAL PROTEIN L36 | polymer | 38 | 4377.4 | 1 | UniProt (X7QRM8) Pfam (PF00444) UniProt (by SIFTS) (P0A7Q6) | ESCHERICHIA COLI | |
| 6 | F (5) | 50S RIBOSOMAL PROTEIN L10 | polymer | 148 | 15981.5 | 1 | UniProt (E1IXH4) Pfam (PF00466) UniProt (by SIFTS) (P0A7J3) | ESCHERICHIA COLI | |
| 7 | G (6) | RIBOSOMAL L7 PROTEIN | polymer | 30 | 3300.9 | 1 | UniProt (V5UZV4) Pfam (PF16320) UniProt (by SIFTS) (P0A7K2) | ESCHERICHIA COLI | |
| 8 | H (7) | TRYPTOPHANASE | polymer | 20 | 2427.8 | 1 | UniProt (A4GWE7) Pfam (PF08053) UniProt (by SIFTS) (P0AD89) | ESCHERICHIA COLI | |
| 9 | I (8) | 50S RIBOSOMAL PROTEIN L25 | polymer | 94 | 10713.5 | 1 | UniProt (E3PCX7) Pfam (PF01386) UniProt (by SIFTS) (P68919) | ESCHERICHIA COLI | |
| 10 | J (A) | RRNA-23S RIBOSOMAL RNA | polymer | 2854 | 925492.1 | 1 | GenBank (64682453) | ESCHERICHIA COLI | |
| 11 | K (B) | RRNA-5S RIBOSOMAL RNA | polymer | 118 | 38177.8 | 1 | GenBank (64693170) | ESCHERICHIA COLI | |
| 12 | L (C) | 50S RIBOSOMAL PROTEIN L2 | polymer | 271 | 29663.2 | 1 | UniProt (X7QS81) Pfam (PF00181) Pfam (PF03947) UniProt (by SIFTS) (P60422) | ESCHERICHIA COLI | |
| 13 | M (D) | 50S RIBOSOMAL PROTEIN L3 | polymer | 209 | 22277.5 | 1 | UniProt (D6IEL8) Pfam (PF00297) UniProt (by SIFTS) (P60438) | ESCHERICHIA COLI | |
| 14 | N (E) | 50S RIBOSOMAL PROTEIN L4 | polymer | 201 | 22121.6 | 1 | UniProt (X7QRP4) Pfam (PF00573) UniProt (by SIFTS) (P60723) | ESCHERICHIA COLI | |
| 15 | O (F) | 50S RIBOSOMAL PROTEIN L5 | polymer | 177 | 20073.2 | 1 | UniProt (X7QU92) Pfam (PF00281) Pfam (PF00673) UniProt (by SIFTS) (P62399) | ESCHERICHIA COLI | |
| 16 | P (G) | 50S RIBOSOMAL PROTEIN L6 | polymer | 176 | 18801.6 | 1 | UniProt (X7QBP9) Pfam (PF00347) UniProt (by SIFTS) (P0AG55) | ESCHERICHIA COLI | |
| 17 | Q (H) | RIBOSOMAL PROTEIN L9 | polymer | 50 | 5467.4 | 1 | UniProt (D8BKG3) Pfam (PF01281) UniProt (by SIFTS) (P0A7R1) | ESCHERICHIA COLI | |
| 18 | R (I) | 50S RIBOSOMAL PROTEIN L11 | polymer | 141 | 14763.2 | 1 | UniProt (E7HV64) Pfam (PF03946) Pfam (PF00298) UniProt (by SIFTS) (P0A7J7) | ESCHERICHIA COLI | |
| 19 | S (J) | 50S RIBOSOMAL PROTEIN L13 | polymer | 142 | 16050.6 | 1 | UniProt (X7QR95) Pfam (PF00572) UniProt (by SIFTS) (P0AA10) | ESCHERICHIA COLI | |
| 20 | T (K) | 50S RIBOSOMAL PROTEIN L14 | polymer | 122 | 13451.9 | 1 | UniProt (E1PGS6) Pfam (PF00238) UniProt (by SIFTS) (P0ADY3) | ESCHERICHIA COLI | |
| 21 | U (L) | 50S RIBOSOMAL PROTEIN L15 | polymer | 143 | 14877.3 | 1 | UniProt (P02413) Pfam (PF00828) | ESCHERICHIA COLI | |
| 22 | V (M) | 50S RIBOSOMAL PROTEIN L16 | polymer | 136 | 15312.3 | 1 | UniProt (D7XL00) Pfam (PF00252) UniProt (by SIFTS) (P0ADY7) | ESCHERICHIA COLI | |
| 23 | W (N) | 50S RIBOSOMAL PROTEIN L17 | polymer | 120 | 13721.9 | 1 | UniProt (X7QRM3) Pfam (PF01196) UniProt (by SIFTS) (P0AG44) | ESCHERICHIA COLI | |
| 24 | X (O) | 50S RIBOSOMAL PROTEIN L18 | polymer | 116 | 12663.5 | 1 | UniProt (X7QRN2) Pfam (PF00861) UniProt (by SIFTS) (P0C018) | ESCHERICHIA COLI | |
| 25 | Y (P) | 50S RIBOSOMAL PROTEIN L19 | polymer | 114 | 13028.1 | 1 | UniProt (X7R0V6) Pfam (PF01245) UniProt (by SIFTS) (P0A7K6) | ESCHERICHIA COLI | |
| 26 | Z (Q) | 50S RIBOSOMAL PROTEIN L20 | polymer | 117 | 13396.8 | 1 | UniProt (X7QXR5) Pfam (PF00453) UniProt (by SIFTS) (P0A7L3) | ESCHERICHIA COLI | |
| 27 | AA (R) | 50S RIBOSOMAL PROTEIN L21 | polymer | 103 | 11586.4 | 1 | UniProt (W0L2B9) Pfam (PF00829) UniProt (by SIFTS) (P0AG48) | ESCHERICHIA COLI | |
| 28 | BA (S) | 50S RIBOSOMAL PROTEIN L22 | polymer | 110 | 12253.4 | 1 | UniProt (E1JB10) Pfam (PF00237) UniProt (by SIFTS) (P61175) | ESCHERICHIA COLI | |
| 29 | CA (T) | 50S RIBOSOMAL PROTEIN L23 | polymer | 93 | 10546.5 | 1 | UniProt (C6EGE8) Pfam (PF00276) UniProt (by SIFTS) (P0ADZ0) | ESCHERICHIA COLI | |
| 30 | DA (U) | 50S RIBOSOMAL PROTEIN L24 | polymer | 102 | 11078.9 | 1 | UniProt (W0L2N0) Pfam (PF00467) Pfam (PF17136) UniProt (by SIFTS) (P60624) | ESCHERICHIA COLI | |
| 31 | EA (V) | RNA | polymer | 77 | 24890.8 | 1 | GenBank (66001753) | ESCHERICHIA COLI | |
| 32 | FA (W) | 50S RIBOSOMAL PROTEIN L27 | polymer | 79 | 8476.7 | 1 | UniProt (W0KYJ4) Pfam (PF01016) UniProt (by SIFTS) (P0A7L8) | ESCHERICHIA COLI | |
| 33 | GA (X) | 50S RIBOSOMAL PROTEIN L28 | polymer | 77 | 8896.4 | 1 | UniProt (C3SME2) Pfam (PF00830) UniProt (by SIFTS) (P0A7M2) | ESCHERICHIA COLI | |
| 34 | HA (Y) | 50S RIBOSOMAL PROTEIN L29 | polymer | 63 | 7286.5 | 1 | UniProt (D7X2Z3) Pfam (PF00831) UniProt (by SIFTS) (P0A7M6) | ESCHERICHIA COLI | |
| 35 | IA (Z) | 50S RIBOSOMAL PROTEIN L30 | polymer | 58 | 6423.6 | 1 | UniProt (W0L301) Pfam (PF00327) UniProt (by SIFTS) (P0AG51) | ESCHERICHIA COLI | |
| 36 | AB, AC, AD, AE, AF... (A, 4, B, C, E) | MAGNESIUM ION | non-polymer | 24.3 | 143 | Chemie (MG) | |||
| 37 | KA (4) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 38 | LA, MA (7) | TRYPTOPHAN | non-polymer | 204.2 | 2 | Chemie (TRP) | |||
| 39 | AG, BG, CG, DG, EG... (B, C, D, E, L...) | water | water | 18.0 | 439 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 35 |
| Total formula weight | 1372306.4 | |
| Non-Polymers* | Number of molecules | 146 |
| Total formula weight | 3949.5 | |
| All* | Total formula weight | 1376255.9 |
