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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

4UY8

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1050S RIBOSOMAL PROTEIN L32polymer566332.21UniProt (U5SG25)
Pfam (PF01783)
UniProt (by SIFTS) (P0A7N4)
In PDB		ESCHERICHIA COLI
2150S RIBOSOMAL PROTEIN L33polymer505814.81UniProt (U5SML7)
Pfam (PF00471)
UniProt (by SIFTS) (P0A7N9)
In PDB		ESCHERICHIA COLI
3250S RIBOSOMAL PROTEIN L34polymer465397.51UniProt (P0A7P5)
Pfam (PF00468)
In PDB		ESCHERICHIA COLI
4350S RIBOSOMAL PROTEIN L35polymer647181.81UniProt (W0KX84)
Pfam (PF01632)
UniProt (by SIFTS) (P0A7Q1)
In PDB		ESCHERICHIA COLI
5450S RIBOSOMAL PROTEIN L36polymer384377.41UniProt (X7QRM8)
Pfam (PF00444)
UniProt (by SIFTS) (P0A7Q6)
In PDB		ESCHERICHIA COLI
6550S RIBOSOMAL PROTEIN L10polymer14815981.51UniProt (E1IXH4)
Pfam (PF00466)
UniProt (by SIFTS) (P0A7J3)
In PDB		ESCHERICHIA COLI
76RIBOSOMAL L7 PROTEINpolymer303300.91UniProt (V5UZV4)
Pfam (PF16320)
UniProt (by SIFTS) (P0A7K2)
In PDB		ESCHERICHIA COLI
87TRYPTOPHANASEpolymer202427.81UniProt (A4GWE7)
Pfam (PF08053)
UniProt (by SIFTS) (P0AD89)
In PDB		ESCHERICHIA COLI
9850S RIBOSOMAL PROTEIN L25polymer9410713.51UniProt (E3PCX7)
Pfam (PF01386)
UniProt (by SIFTS) (P68919)
In PDB		ESCHERICHIA COLI
10ARRNA-23S RIBOSOMAL RNApolymer2854925492.11GenBank (64682453)ESCHERICHIA COLI
11BRRNA-5S RIBOSOMAL RNApolymer11838177.81GenBank (64693170)ESCHERICHIA COLI
12C50S RIBOSOMAL PROTEIN L2polymer27129663.21UniProt (X7QS81)
Pfam (PF00181)
Pfam (PF03947)
UniProt (by SIFTS) (P60422)
In PDB		ESCHERICHIA COLI
13D50S RIBOSOMAL PROTEIN L3polymer20922277.51UniProt (D6IEL8)
Pfam (PF00297)
UniProt (by SIFTS) (P60438)
In PDB		ESCHERICHIA COLI
14E50S RIBOSOMAL PROTEIN L4polymer20122121.61UniProt (X7QRP4)
Pfam (PF00573)
UniProt (by SIFTS) (P60723)
In PDB		ESCHERICHIA COLI
15F50S RIBOSOMAL PROTEIN L5polymer17720073.21UniProt (X7QU92)
Pfam (PF00281)
Pfam (PF00673)
UniProt (by SIFTS) (P62399)
In PDB		ESCHERICHIA COLI
16G50S RIBOSOMAL PROTEIN L6polymer17618801.61UniProt (X7QBP9)
Pfam (PF00347)
UniProt (by SIFTS) (P0AG55)
In PDB		ESCHERICHIA COLI
17HRIBOSOMAL PROTEIN L9polymer505467.41UniProt (D8BKG3)
Pfam (PF01281)
UniProt (by SIFTS) (P0A7R1)
In PDB		ESCHERICHIA COLI
18I50S RIBOSOMAL PROTEIN L11polymer14114763.21UniProt (E7HV64)
Pfam (PF03946)
Pfam (PF00298)
UniProt (by SIFTS) (P0A7J7)
In PDB		ESCHERICHIA COLI
19J50S RIBOSOMAL PROTEIN L13polymer14216050.61UniProt (X7QR95)
Pfam (PF00572)
UniProt (by SIFTS) (P0AA10)
In PDB		ESCHERICHIA COLI
20K50S RIBOSOMAL PROTEIN L14polymer12213451.91UniProt (E1PGS6)
Pfam (PF00238)
UniProt (by SIFTS) (P0ADY3)
In PDB		ESCHERICHIA COLI
21L50S RIBOSOMAL PROTEIN L15polymer14314877.31UniProt (P02413)
Pfam (PF00828)
In PDB		ESCHERICHIA COLI
22M50S RIBOSOMAL PROTEIN L16polymer13615312.31UniProt (D7XL00)
Pfam (PF00252)
UniProt (by SIFTS) (P0ADY7)
In PDB		ESCHERICHIA COLI
23N50S RIBOSOMAL PROTEIN L17polymer12013721.91UniProt (X7QRM3)
Pfam (PF01196)
UniProt (by SIFTS) (P0AG44)
In PDB		ESCHERICHIA COLI
24O50S RIBOSOMAL PROTEIN L18polymer11612663.51UniProt (X7QRN2)
Pfam (PF00861)
UniProt (by SIFTS) (P0C018)
In PDB		ESCHERICHIA COLI
25P50S RIBOSOMAL PROTEIN L19polymer11413028.11UniProt (X7R0V6)
Pfam (PF01245)
UniProt (by SIFTS) (P0A7K6)
In PDB		ESCHERICHIA COLI
26Q50S RIBOSOMAL PROTEIN L20polymer11713396.81UniProt (X7QXR5)
Pfam (PF00453)
UniProt (by SIFTS) (P0A7L3)
In PDB		ESCHERICHIA COLI
27R50S RIBOSOMAL PROTEIN L21polymer10311586.41UniProt (W0L2B9)
Pfam (PF00829)
UniProt (by SIFTS) (P0AG48)
In PDB		ESCHERICHIA COLI
28S50S RIBOSOMAL PROTEIN L22polymer11012253.41UniProt (E1JB10)
Pfam (PF00237)
UniProt (by SIFTS) (P61175)
In PDB		ESCHERICHIA COLI
29T50S RIBOSOMAL PROTEIN L23polymer9310546.51UniProt (C6EGE8)
Pfam (PF00276)
UniProt (by SIFTS) (P0ADZ0)
In PDB		ESCHERICHIA COLI
30U50S RIBOSOMAL PROTEIN L24polymer10211078.91UniProt (W0L2N0)
Pfam (PF00467)
Pfam (PF17136)
UniProt (by SIFTS) (P60624)
In PDB		ESCHERICHIA COLI
31VRNApolymer7724890.81GenBank (66001753)ESCHERICHIA COLI
32W50S RIBOSOMAL PROTEIN L27polymer798476.71UniProt (W0KYJ4)
Pfam (PF01016)
UniProt (by SIFTS) (P0A7L8)
In PDB		ESCHERICHIA COLI
33X50S RIBOSOMAL PROTEIN L28polymer778896.41UniProt (C3SME2)
Pfam (PF00830)
UniProt (by SIFTS) (P0A7M2)
In PDB		ESCHERICHIA COLI
34Y50S RIBOSOMAL PROTEIN L29polymer637286.51UniProt (D7X2Z3)
Pfam (PF00831)
UniProt (by SIFTS) (P0A7M6)
In PDB		ESCHERICHIA COLI
35Z50S RIBOSOMAL PROTEIN L30polymer586423.61UniProt (W0L301)
Pfam (PF00327)
UniProt (by SIFTS) (P0AG51)
In PDB		ESCHERICHIA COLI
36A, 4, B, C, EMAGNESIUM IONnon-polymer24.3143Chemie (MG)
374ZINC IONnon-polymer65.41Chemie (ZN)
387TRYPTOPHANnon-polymer204.22Chemie (TRP)
39waterwater18.0439Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains35
Total formula weight1372306.4
Non-Polymers*Number of molecules146
Total formula weight3949.5
All*Total formula weight1376255.9
*Water molecules are not included.

218853

PDB entries from 2024-04-24

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