4UJD
mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A2) | 28S Ribosomal RNA | polymer | 5025 | 1625917.6 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 2 | B (A3) | 5.8S Ribosomal RNA | polymer | 194 | 62616.3 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 3 | C (A4) | 5S Ribosomal RNA | polymer | 121 | 38998.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 4 | D (AA) | 60S RIBOSOMAL PROTEIN L8 | polymer | 257 | 28088.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN UL2 | |
| 5 | E (AB) | 60S RIBOSOMAL PROTEIN L3 | polymer | 403 | 46211.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | HIV-1 TAR RNA-BINDING PROTEIN B, TARBP-B, 60S RIBOSOMAL PROTEIN UL3 | |
| 6 | F (AC) | 60S RIBOSOMAL PROTEIN L4 | polymer | 427 | 47804.6 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN L1,60S RIBOSOMAL PROTEIN UL4 | |
| 7 | G (AD) | 60S RIBOSOMAL PROTEIN L5 | polymer | 297 | 34426.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN UL18 | |
| 8 | H (AE) | 60S RIBOSOMAL PROTEIN L6 | polymer | 158 | 18219.7 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | NEOPLASM-RELATED PROTEIN C140,TAX-RESPONSIVE ENHANCER ELEMENT-BINDING PROTEIN 107,TAXREB107,60S RIBOSOMAL PROTEIN EL6 | |
| 9 | I (AF) | 60S RIBOSOMAL PROTEIN L7 | polymer | 248 | 29291.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN UL30 | |
| 10 | J (AG) | 60S RIBOSOMAL PROTEIN L7A | polymer | 266 | 30061.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | PLA-X POLYPEPTIDE, SURFEIT LOCUS PROTEIN 3,60S RIBOSOMAL PROTEIN EL8 | |
| 11 | K (AH) | 60S RIBOSOMAL PROTEIN L9 | polymer | 192 | 21899.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN UL6 | |
| 12 | L (AI) | 60S RIBOSOMAL PROTEIN L10 | polymer | 214 | 24657.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | LAMININ RECEPTOR HOMOLOG, PROTEIN QM, TUMOR SUPPRESSOR QM, 60S RIBOSOMAL PROTEIN UL16 | |
| 13 | M (AJ) | 60S RIBOSOMAL PROTEIN L11 | polymer | 178 | 20288.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | CLL-ASSOCIATED ANTIGEN KW-12,60S RIBOSOMAL PROTEIN UL5 | |
| 14 | N (AL) | 60S RIBOSOMAL PROTEIN L13 | polymer | 211 | 24321.7 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | BREAST BASIC CONSERVED PROTEIN 1,60S RIBOSOMAL PROTEIN EL13 | |
| 15 | O (AM) | 60S RIBOSOMAL PROTEIN L14 | polymer | 215 | 23485.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | CAG-ISL 7,60S RIBOSOMAL PROTEIN EL14 | |
| 16 | P (AN) | 60S RIBOSOMAL PROTEIN L15 | polymer | 204 | 24207.3 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN EL15 | |
| 17 | Q (AO) | 60S RIBOSOMAL PROTEIN L13A | polymer | 203 | 23633.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 23 KDA HIGHLY BASIC PROTEIN, 60S RIBOSOMAL PROTEIN UL13 | |
| 18 | R (AP) | 60S RIBOSOMAL PROTEIN L17 | polymer | 184 | 21443.2 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN L23,PD-1,60S RIBOSOMAL PROTEIN UL22 | |
| 19 | S (AQ) | 60S RIBOSOMAL PROTEIN L18 | polymer | 188 | 21687.7 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN EL18 | |
| 20 | T (AR) | 60S RIBOSOMAL PROTEIN L19 | polymer | 196 | 23535.3 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN EL19 | |
| 21 | U (AS) | 60S RIBOSOMAL PROTEIN L18A | polymer | 176 | 20808.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN EL20 | |
| 22 | V (AT) | 60S RIBOSOMAL PROTEIN L21 | polymer | 160 | 18610.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN EL21 | |
| 23 | W (AU) | 60S RIBOSOMAL PROTEIN L22 | polymer | 128 | 14813.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | EBER-ASSOCIATED PROTEIN, EAP, EPSTEIN-BARR VIRUS SMALL RNA-ASSOCIATED PROTEIN, HEPARIN-BINDING PROTEIN HBP15,60S RIBOSOMAL PROTEIN EL22 | |
| 24 | X (AV) | 60S RIBOSOMAL PROTEIN L23 | polymer | 140 | 14892.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN L17,60S RIBOSOMAL PROTEIN UL14 | |
| 25 | Y (AW) | 60S RIBOSOMAL PROTEIN L24 | polymer | 157 | 17825.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN L30,60S RIBOSOMAL PROTEIN EL24 | |
| 26 | Z (AX) | 60S RIBOSOMAL PROTEIN L23A | polymer | 156 | 17740.2 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN UL23 | |
| 27 | AA (AY) | 60S RIBOSOMAL PROTEIN L26 | polymer | 145 | 17303.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN UL24 | |
| 28 | BA (AZ) | 60S RIBOSOMAL PROTEIN L27 | polymer | 136 | 15835.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN EL27 | |
| 29 | CA (Aa) | 60S RIBOSOMAL PROTEIN L27A | polymer | 148 | 16604.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN UL15 | |
| 30 | DA (Ab) | 60S RIBOSOMAL PROTEIN L29 | polymer | 159 | 17804.3 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | CELL SURFACE HEPARIN-BINDING PROTEIN HIP, 60S RIBOSOMAL PROTEIN EL29 | |
| 31 | EA (Ac) | 60S RIBOSOMAL PROTEIN L30 | polymer | 115 | 12805.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN EL30 | |
| 32 | FA (Ad) | 60S RIBOSOMAL PROTEIN L31 | polymer | 125 | 14494.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN EL31 | |
| 33 | GA (Ae) | 60S RIBOSOMAL PROTEIN L32 | polymer | 135 | 15898.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN EL32 | |
| 34 | HA (Af) | 60S RIBOSOMAL PROTEIN L35A | polymer | 110 | 12564.7 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | CELL GROWTH-INHIBITING GENE 33 PROTEIN, 60S RIBOSOMAL PROTEIN EL33 | |
| 35 | IA (Ag) | 60S RIBOSOMAL PROTEIN L34 | polymer | 117 | 13326.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN EL34 | |
| 36 | JA (Ah) | 60S RIBOSOMAL PROTEIN L35 | polymer | 123 | 14593.6 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN UL29 | |
| 37 | KA (Ai) | 60S RIBOSOMAL PROTEIN L36 | polymer | 105 | 12290.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 38 | LA (Aj) | 60S RIBOSOMAL PROTEIN L37 | polymer | 97 | 11111.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | G1.16 | |
| 39 | MA (Ak) | 60S RIBOSOMAL PROTEIN L38 | polymer | 70 | 8238.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 40 | NA (Al) | 60S RIBOSOMAL PROTEIN L39 | polymer | 51 | 6426.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 41 | OA (Am) | UBIQUITIN-60S RIBOSOMAL PROTEIN L40 | polymer | 128 | 14758.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | CEP52,UBIQUITIN A-52 RESIDUE RIBOSOMAL PROTEIN FUSION PRODUCT 1 | |
| 42 | PA (An) | 60S RIBOSOMAL PROTEIN L41 | polymer | 25 | 3473.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | HG12 | |
| 43 | QA (Ao) | 60S RIBOSOMAL PROTEIN L36A | polymer | 106 | 12477.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | 60S RIBOSOMAL PROTEIN L44, CELL GROWTH-INHIBITING GENE 15 PROTEIN, CELL MIGRATION-INDUCING GENE 6 PROTEIN | |
| 44 | RA (Ap) | 60S RIBOSOMAL PROTEIN L37A | polymer | 92 | 10299.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 45 | SA (At) | 60S RIBOSOMAL PROTEIN L28 | polymer | 137 | 15784.6 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 46 | TA (Au) | 60S RIBOSOMAL PROTEIN L10A | polymer | 210 | 23174.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 47 | UA (BA) | TRNA | polymer | 76 | 24485.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 48 | VA (BB) | EIF5B | polymer | 627 | 70788.0 | 1 | UniProt (G1TRL5) Pfam (PF00009) Pfam (PF11987) Pfam (PF14578) | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 49 | WA (BC) | HCV-IRES | polymer | 504 | 162190.1 | 1 | HEPATITIS C VIRUS (HCV) | ||
| 50 | XA (C1) | 18S Ribosomal RNA | polymer | 1869 | 602776.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 51 | YA (CA) | 40S RIBOSOMAL PROTEIN US2 | polymer | 295 | 32883.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 52 | ZA (CB) | 40S RIBOSOMAL PROTEIN ES1 | polymer | 264 | 30002.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 53 | AB (CC) | 40S RIBOSOMAL PROTEIN US5 | polymer | 293 | 31376.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 54 | BB (CD) | 40S RIBOSOMAL PROTEIN US3 | polymer | 243 | 26729.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 55 | CB (CE) | 40S RIBOSOMAL PROTEIN ES4 | polymer | 263 | 29512.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 56 | DB (CF) | 40S RIBOSOMAL PROTEIN US7 | polymer | 204 | 22913.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 57 | EB (CG) | 40S RIBOSOMAL PROTEIN ES6 | polymer | 249 | 28751.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 58 | FB (CH) | 40S RIBOSOMAL PROTEIN ES7 | polymer | 194 | 22168.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 59 | GB (CI) | 40S RIBOSOMAL PROTEIN ES8 | polymer | 208 | 24263.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 60 | HB (CJ) | 40S RIBOSOMAL PROTEIN US4 | polymer | 194 | 22641.6 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 61 | IB (CK) | 40S RIBOSOMAL PROTEIN ES10 | polymer | 165 | 18933.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 62 | JB (CL) | 40S RIBOSOMAL PROTEIN US17 | polymer | 158 | 18468.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 63 | KB (CM) | 40S RIBOSOMAL PROTEIN ES12 | polymer | 132 | 14539.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 64 | LB (CN) | 40S RIBOSOMAL PROTEIN ES15 | polymer | 151 | 17259.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 65 | MB (CO) | 40S RIBOSOMAL PROTEIN ES11 | polymer | 151 | 16302.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 66 | NB (CP) | 40S RIBOSOMAL PROTEIN US19 | polymer | 145 | 17076.2 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 67 | OB (CQ) | 40S RIBOSOMAL PROTEIN US9 | polymer | 146 | 16477.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 68 | PB (CR) | 40S RIBOSOMAL PROTEIN ES17 | polymer | 135 | 15578.2 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 69 | QB (CS) | 40S RIBOSOMAL PROTEIN US13 | polymer | 152 | 17759.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 70 | RB (CT) | 40S RIBOSOMAL PROTEIN ES19 | polymer | 145 | 16091.6 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 71 | SB (CU) | 40S RIBOSOMAL PROTEIN US10 | polymer | 119 | 13398.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 72 | TB (CV) | 40S RIBOSOMAL PROTEIN ES21 | polymer | 83 | 9124.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 73 | UB (CW) | 40S RIBOSOMAL PROTEIN US8 | polymer | 130 | 14865.6 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 74 | VB (CX) | 40S RIBOSOMAL PROTEIN US12 | polymer | 143 | 15844.7 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 75 | WB (CY) | 40S RIBOSOMAL PROTEIN ES24 | polymer | 133 | 15463.3 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 76 | XB (CZ) | 40S RIBOSOMAL PROTEIN ES25 | polymer | 125 | 13776.2 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 77 | YB (Ca) | 40S RIBOSOMAL PROTEIN ES26 | polymer | 115 | 13047.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 78 | ZB (Cb) | 40S RIBOSOMAL PROTEIN ES27 | polymer | 84 | 9480.2 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 79 | AC (Cc) | 40S RIBOSOMAL PROTEIN ES28 | polymer | 69 | 7855.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 80 | BC (Cd) | 40S RIBOSOMAL PROTEIN US14 | polymer | 56 | 6690.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 81 | CC (Ce) | 40S RIBOSOMAL PROTEIN ES30 | polymer | 59 | 6668.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 82 | DC (Cf) | 40S RIBOSOMAL PROTEIN ES31 | polymer | 156 | 18004.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 83 | EC (Cg) | 40S RIBOSOMAL PROTEIN RACK1 | polymer | 317 | 35115.7 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 84 | FC (BB) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | non-polymer | 522.2 | 1 | Chemie (GNP) | |||
| 85 | GC (BB) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 83 |
| Total formula weight | 4044056.4 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 546.5 | |
| All* | Total formula weight | 4044602.9 |
