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4U9I

High Resolution Structure Of The Ni-R State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(S)
Periplasmic [NiFe] hydrogenase small subunitpolymer26528545.41UniProt (P21853)
Pfam (PF01058)
Pfam (PF14720)
Desulfovibrio vulgarisNiFe hydrogenlyase small chain
2B
(L)
Periplasmic [NiFe] hydrogenase large subunitpolymer53359107.31UniProt (P21852)
Pfam (PF00374)
Desulfovibrio vulgarisNiFe hydrogenlyase large chain
3C, D
(S)
IRON/SULFUR CLUSTERnon-polymer351.62Chemie (SF4)
4E
(S)
FE3-S4 CLUSTERnon-polymer295.81Chemie (F3S)
5F, G, H, I, J...
(S, L)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.28Chemie (MPD)
6L
(L)
hydrido[hydridonickel(2+)]bis(hydrocyanato-1kappaC)(hydroxymethyl)ironnon-polymer198.61Chemie (NWN)
7M
(L)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
8P
(L)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.11Chemie (TRS)
9Q, R
(S, L)
waterwater18.0780Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight87652.7
Non-Polymers*Number of molecules14
Total formula weight2289.5
All*Total formula weight89942.2
*Water molecules are not included.

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PDB entries from 2025-07-16

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