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4TS0

Crystal structure of the Spinach RNA aptamer in complex with DFHBI, barium ions

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(X)
Spinach RNA aptamer, bimolecular constructpolymer4414394.61synthetic construct
2B
(Y)
Spinach RNA aptamer, bimolecular constructpolymer4715220.91synthetic construct
3C, D, E, F
(A, B, C, D)
beta-D-fructofuranose-(2-1)-alpha-D-glucopyranosebranched342.34In PDB
BIRD (PRD_900003)
sucrose
4G, H, I, J, K...
(X, Y)
POTASSIUM IONnon-polymer39.110Chemie (K)
5L
(X)
BARIUM IONnon-polymer137.31Chemie (BA)
6R
(Y)
(5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-onenon-polymer252.21Chemie (38E)
7S, T
(X, Y)
waterwater18.015Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight29615.5
BranchedNumber of molecules4
Total formula weight1369.2
Non-Polymers*Number of molecules12
Total formula weight780.5
All*Total formula weight31765.2
*Water molecules are not included.

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PDB entries from 2025-06-18

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