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4RQ7

Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine (8-oxoG)and dATP soaked with MgCl2 for 1hr

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase betapolymer34339258.81UniProt (P06746)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
Homo sapiens (human)
2B
(D)
DNA (5'-D(P*GP*TP*CP*GP*G)-3')polymer51536.01synthetic construct5-mer phosphorylated Downstream Primer
3C
(P)
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*A)-3')polymer113374.21synthetic construct11-mer Primer
4D
(T)
DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')polymer164885.21synthetic construct16-mer Template
5E, F, I, K
(A, D, T)
SODIUM IONnon-polymer23.04Chemie (NA)
6G, H
(A)
CHLORIDE IONnon-polymer35.52Chemie (CL)
7J, L
(P, T)
ACETATE IONnon-polymer59.02Chemie (ACT)
8M, N, O, P
(A, D, P, T)
waterwater18.0202Chemie (HOH)
Sequence modifications
A: 1 - 335 (UniProt: P06746)
PDBExternal DatabaseDetails
Met -1-expression tag
Gly 0-expression tag
His 336-expression tag
His 337-expression tag
His 338-expression tag
His 339-expression tag
His 340-expression tag
His 341-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight49054.2
Non-Polymers*Number of molecules8
Total formula weight281.0
All*Total formula weight49335.1
*Water molecules are not included.

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PDB entries from 2025-06-11

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