4RM0
Crystal structure of Norovirus OIF P domain in complex with Lewis a trisaccharide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Capsid protein | polymer | 316 | 34425.3 | 2 | UniProt (Q6B7R3) Pfam (PF08435) | Norovirus | |
| 2 | C (C) | beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 529.5 | 1 | In PDB BIRD (PRD_900129) GlyTouCan (G39023AU) | |||
| 3 | D (D) | beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-alpha-D-glucopyranose | branched | 529.5 | 1 | In PDB BIRD (PRD_900130) GlyTouCan (G65372SM) | |||
| 4 | E, F (A, B) | water | water | 18.0 | 541 | Chemie (HOH) |
Sequence modifications
A, B: 220 - 527 (UniProt: Q6B7R3)
| PDB | External Database | Details |
|---|---|---|
| Gly 212 | - | expression tag |
| Pro 213 | - | expression tag |
| Leu 214 | - | expression tag |
| Gly 215 | - | expression tag |
| Ser 216 | - | expression tag |
| Pro 217 | - | expression tag |
| Glu 218 | - | expression tag |
| Phe 219 | - | expression tag |
| Asn 375 | His 375 | engineered mutation |
| Ile 376 | His 376 | engineered mutation |
| Ala 377 | Ser 377 | engineered mutation |
| Ser 378 | Gln 378 | engineered mutation |
| Asn 379 | His 379 | engineered mutation |
| Val 387 | Leu 387 | engineered mutation |
| Ile 389 | Val 389 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 68850.5 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1059.0 | |
| All* | Total formula weight | 69909.5 |
