4RFL
Crystal structure of G1PDH with NADPH from Methanocaldococcus jannaschii
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Glycerol-1-phosphate dehydrogenase [NAD(P)+] | polymer | 371 | 41462.7 | 4 | UniProt (Q58122) Pfam (PF13685) | Methanocaldococcus jannaschii DSM 2661 | G1P dehydrogenase, G1PDH, Enantiomeric glycerophosphate synthase, sn-glycerol-1-phosphate dehydrogenase |
| 2 | AA, E, N, S (D, A, B, C) | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 745.4 | 4 | Chemie (NDP) | |||
| 3 | BA, F, O, T (D, A, B, C) | POTASSIUM ION | non-polymer | 39.1 | 4 | Chemie (K) | |||
| 4 | CA, G, P, U (D, A, B, C) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 5 | DA, EA, FA, H, I... (D, A, B, C) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 15 | Chemie (EDO) | |||
| 6 | Z (C) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 7 | GA, HA, IA, JA (A, B, C, D) | water | water | 18.0 | 439 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 335 (UniProt: Q58122)
| PDB | External Database | Details |
|---|---|---|
| Met -35 | - | expression tag |
| Arg -34 | - | expression tag |
| Gly -33 | - | expression tag |
| Ser -32 | - | expression tag |
| His -31 | - | expression tag |
| His -30 | - | expression tag |
| His -29 | - | expression tag |
| His -28 | - | expression tag |
| His -27 | - | expression tag |
| His -26 | - | expression tag |
| Gly -25 | - | expression tag |
| Met -24 | - | expression tag |
| Ala -23 | - | expression tag |
| Ser -22 | - | expression tag |
| Met -21 | - | expression tag |
| Thr -20 | - | expression tag |
| Gly -19 | - | expression tag |
| Gly -18 | - | expression tag |
| Gln -17 | - | expression tag |
| Gln -16 | - | expression tag |
| Met -15 | - | expression tag |
| Gly -14 | - | expression tag |
| Arg -13 | - | expression tag |
| Asp -12 | - | expression tag |
| Leu -11 | - | expression tag |
| Tyr -10 | - | expression tag |
| Asp -9 | - | expression tag |
| Asp -8 | - | expression tag |
| Asp -7 | - | expression tag |
| Asp -6 | - | expression tag |
| Lys -5 | - | expression tag |
| Asp -4 | - | expression tag |
| His -3 | - | expression tag |
| Pro -2 | - | expression tag |
| Phe -1 | - | expression tag |
| Thr 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 165850.8 | |
| Non-Polymers* | Number of molecules | 28 |
| Total formula weight | 4353.7 | |
| All* | Total formula weight | 170204.6 |
