4RDL
Crystal structure of Norovirus Boxer P domain in complex with Lewis y tetrasaccharide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Capsid | polymer | 308 | 33758.9 | 2 | UniProt (Q8BCA3) Pfam (PF08435) In PDB | Human calicivirus NLV/Boxer/2001/US | |
| 2 | C, D | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose | branched | 675.6 | 2 | In PDB BIRD (PRD_900124) GlyTouCan (G82236PZ) | Lewis Y antigen, alpha anomer | ||
| 3 | water | water | 18.0 | 825 | Chemie (HOH) |
Sequence modifications
A, B: 227 - 526 (UniProt: Q8BCA3)
| PDB | External Database | Details |
|---|---|---|
| Gly 219 | - | expression tag |
| Pro 220 | - | expression tag |
| Leu 221 | - | expression tag |
| Gly 222 | - | expression tag |
| Ser 223 | - | expression tag |
| Pro 224 | - | expression tag |
| Glu 225 | - | expression tag |
| Phe 226 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 67517.8 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1351.3 | |
| All* | Total formula weight | 68869.0 |
