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4QW9

TERNARY CRYSTAL STRUCTURES of A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND (-)FTC-PPNP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase IVpolymer34940090.71UniProt (Q97W02)
Pfam (PF00817)
Pfam (PF11798)
Pfam (PF11799)
Sulfolobus solfataricusPol IV
2B
(C)
DNA (5'-D(P*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*C)-3')polymer133976.61
3C
(D)
DNA (5'-D(P*CP*AP*GP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3')polymer164899.21
4D
(A)
[[[[(2R,5S)-5-(4-azanyl-5-fluoranyl-2-oxidanylidene-pyrimidin-1-yl)-1,3-oxathiolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy -oxidanyl-phosphoryl]amino]phosphonic acidnon-polymer486.21Chemie (0G4)
5E, F, G
(A)
CALCIUM IONnon-polymer40.13Chemie (CA)
6H, I, J
(A, C, D)
waterwater18.0135Chemie (HOH)
Sequence modifications
A: 1 - 341 (UniProt: Q97W02)
PDBExternal DatabaseDetails
Leu 342-expression tag
Glu 343-expression tag
His 344-expression tag
His 345-expression tag
His 346-expression tag
His 347-expression tag
His 348-expression tag
His 349-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight48966.4
Non-Polymers*Number of molecules4
Total formula weight606.4
All*Total formula weight49572.9
*Water molecules are not included.

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PDB entries from 2025-06-18

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