4Q3C
PylD cocrystallized with L-Lysine-Ne-L-lysine and NAD+
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | PylD, pyrrolysine synthase | polymer | 260 | 27963.8 | 4 | UniProt (Q46E80) Pfam (PF21455) | Methanosarcina barkeri | |
| 2 | E, O, U, Y (A, B, C, D) | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | non-polymer | 663.4 | 4 | Chemie (NAD) | |||
| 3 | F, P, V, Z (A, B, C, D) | SODIUM ION | non-polymer | 23.0 | 4 | Chemie (NA) | |||
| 4 | AA, G, Q, W (D, A, B, C) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 5 | BA, H, R, X (D, A, B, C) | N~6~-L-lysyl-L-lysine | non-polymer | 274.4 | 4 | Chemie (2YG) | |||
| 6 | I, J, K, S (A, B) | GLYCEROL | non-polymer | 92.1 | 4 | Chemie (GOL) | |||
| 7 | L, M, N (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
| 8 | T (B) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 9 | CA, DA, EA, FA (A, B, C, D) | water | water | 18.0 | 273 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 259 (UniProt: Q46E80)
| PDB | External Database | Details |
|---|---|---|
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 111855.3 | |
| Non-Polymers* | Number of molecules | 24 |
| Total formula weight | 4601.0 | |
| All* | Total formula weight | 116456.3 |
