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4Q39

PylD in complex with pyrrolysine and NADH

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
PYLD, pyrrolysine synthasepolymer26027963.82UniProt (Q46E80)
Pfam (PF21455)
Methanosarcina barkeri
2C, K
(A, B)
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDEnon-polymer665.42Chemie (NAI)
3D, L
(A, B)
SODIUM IONnon-polymer23.02Chemie (NA)
4E, M
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
5F, N
(A, B)
PYRROLYSINEnon-polymer255.32Chemie (PYL)
6G, H
(A)
GLYCEROLnon-polymer92.12Chemie (GOL)
7I, O
(A, B)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
8J
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
9P, Q
(A, B)
waterwater18.0207Chemie (HOH)
Sequence modifications
A, B: 1 - 259 (UniProt: Q46E80)
PDBExternal DatabaseDetails
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight55927.6
Non-Polymers*Number of molecules13
Total formula weight2350.5
All*Total formula weight58278.2
*Water molecules are not included.

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PDB entries from 2025-12-31

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