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4PJ0

Structure of T.elongatus Photosystem II, rows of dimers crystal packing

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, T
(A, a)
Photosystem Q(B) protein 1polymer34438265.62UniProt (P0A444)
Pfam (PF00124)
Thermosynechococcus elongatus32 kDa thylakoid membrane protein 1,Photosystem II protein D1 1
2B, U
(B, b)
CP47 proteinpolymer51056656.52UniProt (Q9F1M3)
Pfam (PF00421)
UniProt (by SIFTS) (Q8DIQ1)
Thermosynechococcus elongatus
3C, V
(C, c)
Photosystem II CP43 proteinpolymer46150287.52UniProt (Q8DIF8)
Pfam (PF00421)
Thermosynechococcus elongatus
4D, W
(D, d)
Photosystem II D2 proteinpolymer35239388.22UniProt (Q8CM25)
Pfam (PF00124)
Thermosynechococcus elongatusPSII D2 protein,Photosystem Q(A) protein
5E, X
(E, e)
Cytochrome b559 subunit alphapolymer849580.82UniProt (Q8DIP0)
Pfam (PF00283)
Pfam (PF00284)
Thermosynechococcus elongatusPSII reaction center subunit V
6F, Y
(F, f)
Cytochrome b559 subunit betapolymer455067.92UniProt (Q8DIN9)
Pfam (PF00283)
Thermosynechococcus elongatusPSII reaction center subunit VI
7G, Z
(H, h)
Photosystem II reaction center protein Hpolymer667358.82UniProt (Q8DJ43)
Pfam (PF00737)
Thermosynechococcus elongatusPSII-H
8AA, H
(I, i)
Photosystem II reaction center protein Ipolymer384410.22UniProt (Q8DJZ6)
Pfam (PF02532)
Thermosynechococcus elongatusPSII-I,PSII 4.4 kDa protein
9BA, I
(J, j)
Photosystem II reaction center protein Jpolymer404105.92UniProt (P59087)
Pfam (PF01788)
Thermosynechococcus elongatusPSII-J
10CA, J
(K, k)
Photosystem II reaction center protein Kpolymer465028.12UniProt (Q9F1K9)
Pfam (PF02533)
Thermosynechococcus elongatusPSII-K
11DA, K
(L, l)
Photosystem II reaction center protein Lpolymer374299.02UniProt (Q8DIN8)
Pfam (PF02419)
Thermosynechococcus elongatusPSII-L,PSII 5 kDa protein
12EA, L
(M, m)
Photosystem II reaction center protein Mpolymer363981.72UniProt (Q8DHA7)
Pfam (PF05151)
Thermosynechococcus elongatusPSII-M
13FA, M
(O, o)
Photosystem II manganese-stabilizing polypeptidepolymer27229637.42UniProt (P0A431)
Pfam (PF01716)
Thermosynechococcus elongatusMSP
14GA, N
(T, t)
Photosystem II reaction center protein Tpolymer323878.72UniProt (Q8DIQ0)
Pfam (PF01405)
Thermosynechococcus elongatusPSII-Tc
15HA, O
(U, u)
Photosystem II 12 kDa extrinsic proteinpolymer13415031.02UniProt (Q9F1L5)
Pfam (PF06514)
Thermosynechococcus elongatusPS II complex 12 kDa extrinsic protein,PSII-U
16IA, P
(V, v)
Cytochrome c-550polymer16318046.92UniProt (P0A386)
Pfam (PF14495)
Thermosynechococcus elongatusCytochrome c-549,Cytochrome c550,Low-potential cytochrome c
17MA, Q
(Y, y)
Photosystem II reaction center protein Ycf12polymer465039.12UniProt (Q8DJI1)
Pfam (PF05969)
Thermosynechococcus elongatus
18JA, R
(X, x)
Photosystem II reaction center X proteinpolymer414322.22UniProt (Q9F1R6)
Pfam (PF06596)
Thermosynechococcus elongatus
19NA, S
(Z, z)
Photosystem II reaction center protein Zpolymer626766.22UniProt (Q8DHJ2)
Pfam (PF01737)
Thermosynechococcus elongatusPSII-Z
20KA, LA
(R, r)
Photosystem II protein Ypolymer414590.62UniProt (Q8DKM3)
Pfam (PF06298)
Thermosynechococcus elongatus
21HE, OA
(a, A)
CA-MN4-O5 CLUSTERnon-polymer339.82Chemie (OEX)
22IE, PA
(a, A)
FE (III) IONnon-polymer55.82Chemie (FE)
23BC, BH, JD, JE, QA...
(B, d, D, a, A...)
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDEnon-polymer787.214Chemie (LMG)
24KE, LE, RA, SA
(a, A)
CHLORIDE IONnon-polymer35.54Chemie (CL)
25AF, AG, BF, BG, CF...
(b, c, D, B, C...)
CHLOROPHYLL Anon-polymer893.570Chemie (CLA)
26AD, AE, GD, GH, LH...
(C, T, D, h, k...)
BETA-CAROTENEnon-polymer536.922Chemie (BCR)
27HD, SE, XA, YG
(D, a, A, d)
2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONEnon-polymer749.24Chemie (PL9)
28FH, ND, TD, TE, VD...
(f, F, L, a, A)
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLnon-polymer795.16Chemie (SQD)
29AB, AH, BB, ID, LD...
(A, d, D, E, l...)
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLEnon-polymer723.010Chemie (LHG)
30CB, DE, DH, FE, PH...
(A, U, d, V, o...)
SULFATE IONnon-polymer96.110Chemie (SO4)
31DB, YE
(A, a)
BICARBONATE IONnon-polymer61.02Chemie (BCT)
32AC, BE, CC, CE, CH...
(B, T, d, X, i...)
UNKNOWN LIGANDnon-polymer29Chemie (UNL)
33HH, NG, OG, PD, PG...
(h, c, H, C)
DIGALACTOSYL DIACYL GLYCEROL (DGDG)non-polymer949.38Chemie (DGD)
34BD, CD, PE, VG
(D, a, d)
PHEOPHYTIN Anon-polymer871.24Chemie (PHO)
35EH, MD
(e, E)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.52Chemie (HEM)
36EE, UH
(V, v)
HEME Cnon-polymer618.52Chemie (HEC)
37AI, BI, CI, DI, EI...
(D, E, H, L, O...)
waterwater18.0304Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains40
Total formula weight631485.0
Non-Polymers*Number of molecules191
Total formula weight115937.8
All*Total formula weight747422.8
*Water molecules are not included.

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PDB entries from 2025-06-11

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