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4PH5

Structure of human DNA polymerase beta complexed with a nicked DNA containing a AC at N-1 position and GC at N position

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(T)
DNA (5'-D(*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')polymer164853.21synthetic construct
2B
(P)
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3')polymer113350.21synthetic construct
3C
(D)
DNA (5'-D(P*GP*TP*CP*GP*G)-3')polymer51536.01synthetic construct
4D
(A)
DNA polymerase betapolymer32637182.41UniProt (P06746)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
Homo sapiens (Human)
5E, F
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6G, H
(A)
SODIUM IONnon-polymer23.02Chemie (NA)
7I
(A)
PHOSPHATE IONnon-polymer95.01Chemie (PO4)
8J, K, L, M
(T, P, D, A)
waterwater18.068Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight46921.8
Non-Polymers*Number of molecules5
Total formula weight189.6
All*Total formula weight47111.3
*Water molecules are not included.

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PDB entries from 2025-06-11

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