4PGC
MHC Class I in complex with modified Sendai virus nucleoprotein peptide FAPGN(3,5-diiodotyrosine)PAL
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D | H-2 class I histocompatibility antigen, K-B alpha chain | polymer | 304 | 34957.0 | 2 | UniProt (P01901) Pfam (PF00129) Pfam (PF07654) In PDB | Mus musculus (Mouse) | H-2K(B) |
2 | B, E | Beta-2-microglobulin | polymer | 100 | 11835.6 | 2 | UniProt (P01887) Pfam (PF07654) In PDB | Mus musculus (Mouse) | |
3 | C, F | Sendai virus nucleoprotein | polymer | 9 | 1200.9 | 2 | UniProt (by SIFTS) (O57286) In PDB | Sendai virus | |
4 | H | Unknown helical fragment | polymer | 13 | 1214.5 | 1 | Escherichia coli | ||
5 | A, B, D, E | GLYCEROL | non-polymer | 92.1 | 6 | Chemie (GOL) | |||
6 | water | water | 18.0 | 57 | Chemie (HOH) |
Sequence modifications
A, D: 1 - 278 (UniProt: P01901)
B, E: 1 - 99 (UniProt: P01887)
PDB | External Database | Details |
---|---|---|
Met -25 | - | initiating methionine |
Gly -24 | - | expression tag |
Ser -23 | - | expression tag |
Ser -22 | - | expression tag |
His -21 | - | expression tag |
His -20 | - | expression tag |
His -19 | - | expression tag |
His -18 | - | expression tag |
His -17 | - | expression tag |
His -16 | - | expression tag |
Ser -15 | - | expression tag |
Ser -14 | - | expression tag |
Gly -13 | - | expression tag |
Leu -12 | - | expression tag |
Val -11 | - | expression tag |
Pro -10 | - | expression tag |
Arg -9 | - | expression tag |
Gly -8 | - | expression tag |
Ser -7 | - | expression tag |
His -6 | - | expression tag |
Met -5 | - | expression tag |
Leu -4 | - | expression tag |
Glu -3 | - | expression tag |
Asp -2 | - | expression tag |
Pro -1 | - | expression tag |
Met 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
Asp 85 | Ala 105 | variant |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 7 |
Total formula weight | 97201.3 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 552.6 | |
All* | Total formula weight | 97753.9 |