4PF6
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM ROSEOBACTER DENITRIFICANS (RD1_0742, TARGET EFI-510239) WITH BOUND 3-DEOXY-D-MANNO-OCT-2-ULOSONIC ACID (KDO)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | C4-dicarboxylate-binding protein | polymer | 330 | 36671.3 | 1 | UniProt (Q16C67) Pfam (PF03480) | Roseobacter denitrificans (Erythrobacter sp. (strain OCh 114)) | TRAP PERIPLASMIC SOLUTE BINDING PROTEIN |
| 2 | B (A) | 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid | non-polymer | 238.2 | 1 | Chemie (KDO) | |||
| 3 | C (A) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 4 | D, E (A) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 5 | F (A) | water | water | 18.0 | 434 | Chemie (HOH) |
Sequence modifications
A: 25 - 331 (UniProt: Q16C67)
| PDB | External Database | Details |
|---|---|---|
| Mse 2 | - | initiating methionine |
| His 3 | - | expression tag |
| His 4 | - | expression tag |
| His 5 | - | expression tag |
| His 6 | - | expression tag |
| His 7 | - | expression tag |
| His 8 | - | expression tag |
| Ser 9 | - | expression tag |
| Ser 10 | - | expression tag |
| Gly 11 | - | expression tag |
| Val 12 | - | expression tag |
| Asp 13 | - | expression tag |
| Leu 14 | - | expression tag |
| Gly 15 | - | expression tag |
| Thr 16 | - | expression tag |
| Glu 17 | - | expression tag |
| Asn 18 | - | expression tag |
| Leu 19 | - | expression tag |
| Tyr 20 | - | expression tag |
| Phe 21 | - | expression tag |
| Gln 22 | - | expression tag |
| Ser 23 | - | expression tag |
| Mse 24 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 36671.3 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 580.5 | |
| All* | Total formula weight | 37251.8 |
