4PD7
Structure of vcCNT bound to zebularine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | NupC family protein | polymer | 424 | 44171.9 | 1 | UniProt (Q9KPL5) Pfam (PF01773) Pfam (PF07670) Pfam (PF07662) | Vibrio cholerae serotype O1 | |
| 2 | B (A) | Zebularine | non-polymer | 228.2 | 1 | Chemie (ZE8) PubChem (16760709) PubChem (17756793) PubChem (100016) PubChem (328839) PubChem (25886234) PubChem (29987926) PubChem (44320516) PubChem (46783268) PubChem (46874484) PubChem (51380955) PubChem (51382706) PubChem (51424979) PubChem (51424980) PubChem (51424981) PubChem (67036382) PubChem (68322689) PubChem (70641093) PubChem (10878902) PubChem (89872315) PubChem (132181045) PubChem (133687348) PubChem (146762280) PubChem (163296678) PubChem (173831854) | |||
| 3 | C (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) PubChem (923) | |||
| 4 | D (A) | DECYL-BETA-D-MALTOPYRANOSIDE | non-polymer | 482.6 | 1 | Chemie (DMU) PubChem (24776995) PubChem (16396531) PubChem (24802064) PubChem (45253991) PubChem (45254001) PubChem (45253971) PubChem (49866911) PubChem (56845266) PubChem (3637526) PubChem (58112552) PubChem (59518661) PubChem (5288091) PubChem (70796430) PubChem (70839938) PubChem (71307274) PubChem (95370474) PubChem (95370475) PubChem (95370476) PubChem (98046559) PubChem (98046561) PubChem (95370473) PubChem (100941450) PubChem (100950626) PubChem (98046563) PubChem (5288728) PubChem (101207920) PubChem (102219024) PubChem (126735852) PubChem (118704896) PubChem (123134571) PubChem (124867949) PubChem (124867950) PubChem (124867951) PubChem (124867952) PubChem (126731012) PubChem (126731036) PubChem (126735974) PubChem (168490163) | |||
| 5 | E (A) | water | water | 18.0 | 3 | Chemie (HOH) |
Sequence modifications
A: 1 - 418 (UniProt: Q9KPL5)
| PDB | External Database | Details |
|---|---|---|
| Gly -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Ala -3 | - | expression tag |
| Val -2 | - | expression tag |
| Pro -1 | - | expression tag |
| Arg 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 44171.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 733.8 | |
| All* | Total formula weight | 44905.6 |
