4OQP
Structure of the effector-binding domain of deoxyribonucleoside regulator DeoR from Bacillus subtilis in complex with deoxyribose-5-phosphate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Deoxyribonucleoside regulator | polymer | 264 | 29371.4 | 1 | UniProt (P39140) Pfam (PF04198) In PDB | Bacillus subtilis subsp. subtilis | |
| 2 | A | PENTANE-3,4-DIOL-5-PHOSPHATE | non-polymer | 200.1 | 1 | Chemie (PED) | |||
| 3 | A | CADMIUM ION | non-polymer | 112.4 | 1 | Chemie (CD) | |||
| 4 | A | NICKEL (II) ION | non-polymer | 58.7 | 3 | Chemie (NI) | |||
| 5 | A | COBALT (II) ION | non-polymer | 58.9 | 1 | Chemie (CO) | |||
| 6 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 7 | water | water | 18.0 | 264 | Chemie (HOH) |
Sequence modifications
A: 56 - 313 (UniProt: P39140)
| PDB | External Database | Details |
|---|---|---|
| Gly 50 | - | expression tag |
| Ile 51 | - | expression tag |
| Asp 52 | - | expression tag |
| Pro 53 | - | expression tag |
| Phe 54 | - | expression tag |
| Thr 55 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 29371.4 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 571.9 | |
| All* | Total formula weight | 29943.3 |
