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4OPX

Structure of Human PARP-1 bound to a DNA double strand break in complex with (2R)-5-fluoro-2-methyl-2,3-dihydro-1-benzofuran-7-carboxamide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, DPoly [ADP-ribose] polymerase 1polymer26730520.12UniProt (P09874)
Pfam (PF00645)
Pfam (PF21728)
Pfam (PF08063)
In PDB
Homo sapiens (human)PARP-1, ADP-ribosyltransferase diphtheria toxin-like 1, ARTD1, NAD(+) ADP-ribosyltransferase 1, ADPRT 1, Poly[ADP-ribose] synthase 1
2C, FPoly [ADP-ribose] polymerase 1polymer50557035.02UniProt (P09874)
Pfam (PF05406)
Pfam (PF02877)
Pfam (PF00644)
In PDB
Homo sapiens (human)PARP-1, ADP-ribosyltransferase diphtheria toxin-like 1, ARTD1, NAD(+) ADP-ribosyltransferase 1, ADPRT 1, Poly[ADP-ribose] synthase 1
3M, NDNA (26-MER)polymer267990.12
4A, DZINC IONnon-polymer65.44Chemie (ZN)
5C(2R)-5-fluoro-2-methyl-2,3-dihydro-1-benzofuran-7-carboxamidenon-polymer195.21Chemie (2UR)
Sequence modifications
A, D: 1 - 204 (UniProt: P09874)
A, D: 207 - 366 (UniProt: P09874)
PDBExternal DatabaseDetails
Asp 205-linker
Ile 206-linker
Leu 367-expression tag
Glu 368-expression tag
His 369-expression tag
His 370-expression tag
His 371-expression tag
His 372-expression tag
His 373-expression tag
His 374-expression tag
C, F: 518 - 1014 (UniProt: P09874)
PDBExternal DatabaseDetails
Leu 1015-expression tag
Glu 1016-expression tag
His 1017-expression tag
His 1018-expression tag
His 1019-expression tag
His 1020-expression tag
His 1021-expression tag
His 1022-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight191090.4
Non-Polymers*Number of molecules5
Total formula weight456.8
All*Total formula weight191547.2
*Water molecules are not included.

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PDB entries from 2024-04-17

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