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4OLV

Crystal structure of antibody VRC07-G54F in complex with clade A/E 93TH057 HIV-1 gp120 core

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(G)
Envelope glycoprotein gp160polymer35339211.41UniProt (Q0ED31)
Pfam (PF00516)
Human immunodeficiency virus 1
2B
(H)
Antigen binding fragment of heavy chain: Antibody VRC01polymer22825014.31Homo sapiens
3C
(L)
Antigen binding fragment of light chain: Antibody VRC01polymer21023089.61Homo sapiens
4D, E, F, G, H...
(G)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.211Chemie (NAG)
5O, P, Q
(G, H, L)
waterwater18.0294Chemie (HOH)
Sequence modifications
G: 44 - 123 (UniProt: Q0ED31)
G: 199 - 301 (UniProt: Q0ED31)
PDBExternal DatabaseDetails
Gly 124-linker
Gly 198-linker
G: 324 - 492 (UniProt: Q0ED31)
PDBExternal DatabaseDetails
Gly 318-linker
Gly 319-linker
Ser 320-linker
Gly 321-linker
Ser 322-linker
Gly 323-linker
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight87315.4
Non-Polymers*Number of molecules11
Total formula weight2433.3
All*Total formula weight89748.6
*Water molecules are not included.

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PDB entries from 2025-06-18

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