4OJD
Crystal structure of a C-terminally truncated trimeric ectodomain of the C. elegans fusion protein EFF-1 G260A/D321E/D322E mutant
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (H) | EFF-1A | polymer | 526 | 59083.9 | 1 | UniProt (G5ECA1) Pfam (PF14884) | Caenorhabditis elegans (nematode) | Protein EFF-1, isoform a |
| 2 | B (A) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 3 | C, D (H) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 4 | E (H) | water | water | 18.0 | 89 | Chemie (HOH) |
Sequence modifications
H: 23 - 509 (UniProt: G5ECA1)
| PDB | External Database | Details |
|---|---|---|
| Arg 21 | - | expression tag |
| Ser 22 | - | expression tag |
| Ala 260 | Gly 260 | engineered mutation |
| Glu 321 | Asp 321 | engineered mutation |
| Glu 322 | Asp 322 | engineered mutation |
| Phe 510 | - | expression tag |
| Glu 511 | - | expression tag |
| Asp 512 | - | expression tag |
| Asp 513 | - | expression tag |
| Asp 514 | - | expression tag |
| Asp 515 | - | expression tag |
| Lys 516 | - | expression tag |
| Ala 517 | - | expression tag |
| Gly 518 | - | expression tag |
| Trp 519 | - | expression tag |
| Ser 520 | - | expression tag |
| His 521 | - | expression tag |
| Pro 522 | - | expression tag |
| Gln 523 | - | expression tag |
| Phe 524 | - | expression tag |
| Glu 525 | - | expression tag |
| Lys 526 | - | expression tag |
| Gly 527 | - | expression tag |
| Gly 528 | - | expression tag |
| Gly 529 | - | expression tag |
| Ser 530 | - | expression tag |
| Gly 531 | - | expression tag |
| Gly 532 | - | expression tag |
| Gly 533 | - | expression tag |
| Ser 534 | - | expression tag |
| Gly 535 | - | expression tag |
| Gly 536 | - | expression tag |
| Gly 537 | - | expression tag |
| Ser 538 | - | expression tag |
| Trp 539 | - | expression tag |
| Ser 540 | - | expression tag |
| His 541 | - | expression tag |
| Pro 542 | - | expression tag |
| Gln 543 | - | expression tag |
| Phe 544 | - | expression tag |
| Glu 545 | - | expression tag |
| Lys 546 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 59083.9 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 586.5 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 442.4 | |
| All* | Total formula weight | 60112.8 |
