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4OHY

C. Elegans Clp1 bound to ssRNA dinucleotide GC, AMP-PNP, and Mg2+(inhibited substrate bound state)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Protein clpf-1polymer43147936.51UniProt (P52874)
Pfam (PF16573)
Pfam (PF16575)
Pfam (PF06807)
Caenorhabditis elegans (nematode)
2B
(B)
RNA (5'-R(*GP*C)-3')polymer2605.41
3C
(A)
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.21Chemie (ANP)
4D
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
5E
(A)
NONAETHYLENE GLYCOLnon-polymer414.51Chemie (2PE)
6F, G
(A, B)
waterwater18.0149Chemie (HOH)
Sequence modifications
A: 1 - 428 (UniProt: P52874)
PDBExternal DatabaseDetails
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight48541.9
Non-Polymers*Number of molecules3
Total formula weight945.0
All*Total formula weight49486.9
*Water molecules are not included.

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PDB entries from 2025-06-18

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