4OF6
Crystal Structure of SYG-1 D1, Crystal form 1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Protein SYG-1, isoform b | polymer | 120 | 13371.9 | 2 | UniProt (B1Q236) Pfam (PF07679) | Caenorhabditis elegans (nematode) | |
| 2 | C (C) | alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G11971MR) | |||
| 3 | D (D) | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 1 | In PDB GlyTouCan (G86851RC) | |||
| 4 | E, F, G (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
| 5 | H, I (A, B) | water | water | 18.0 | 273 | Chemie (HOH) |
Sequence modifications
A, B: 19 - 129 (UniProt: B1Q236)
| PDB | External Database | Details |
|---|---|---|
| Ala 16 | - | expression tag |
| Asp 17 | - | expression tag |
| Pro 18 | - | expression tag |
| His 130 | - | expression tag |
| His 131 | - | expression tag |
| His 132 | - | expression tag |
| His 133 | - | expression tag |
| His 134 | - | expression tag |
| His 135 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 26743.8 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 937.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 186.2 | |
| All* | Total formula weight | 27867.9 |
