4OD5
Substrate-bound structure of a UbiA homolog from Aeropyrum pernix K1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | 4-hydroxybenzoate octaprenyltransferase | polymer | 303 | 31836.5 | 6 | UniProt (Q9YBM8) Pfam (PF01040) | Aeropyrum pernix | |
| 2 | AA, G, K, O, S... (F, A, B, C, D...) | GERANYL S-THIOLODIPHOSPHATE | non-polymer | 330.3 | 6 | Chemie (GST) | |||
| 3 | BA, H, L, P, T... (F, A, B, C, D...) | P-HYDROXYBENZOIC ACID | non-polymer | 138.1 | 6 | Chemie (PHB) | |||
| 4 | CA, DA, I, J, M... (F, A, B, C, D...) | MAGNESIUM ION | non-polymer | 24.3 | 12 | Chemie (MG) | |||
| 5 | EA, FA, GA, HA, IA... (A, B, C, D, E...) | water | water | 18.0 | 6 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 284 (UniProt: Q9YBM8)
| PDB | External Database | Details |
|---|---|---|
| Met -18 | - | expression tag |
| Gly -17 | - | expression tag |
| Ser -16 | - | expression tag |
| Ser -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Ser -7 | - | expression tag |
| Gly -6 | - | expression tag |
| Leu -5 | - | expression tag |
| Val -4 | - | expression tag |
| Pro -3 | - | expression tag |
| Ala -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 191018.8 | |
| Non-Polymers* | Number of molecules | 24 |
| Total formula weight | 3102.0 | |
| All* | Total formula weight | 194120.8 |






