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4O8P

Crystal structure of SthAraf62A, a GH62 family alpha-L-arabinofuranosidase from Streptomyces thermoviolaceus, bound to xylotetraose

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Alpha-L-arabinofuranosidasepolymer38442096.51UniProt (Q76BV4)Streptomyces thermoviolaceus
2B
(B)
beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranosebranched546.51In PDB
GlyTouCan (G60650FG)
3C
(A)
CALCIUM IONnon-polymer40.11Chemie (CA)
4D, E
(A)
3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOLnon-polymer634.82Chemie (PE3)
5F
(A)
POTASSIUM IONnon-polymer39.11Chemie (K)
6G
(A)
waterwater18.0473Chemie (HOH)
Sequence modifications
A: 1 - 363 (UniProt: Q76BV4)
PDBExternal DatabaseDetails
Met -20-expression tag
Gly -19-expression tag
Ser -18-expression tag
Ser -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
Ser -10-expression tag
Ser -9-expression tag
Gly -8-expression tag
Arg -7-expression tag
Glu -6-expression tag
Asn -5-expression tag
Leu -4-expression tag
Tyr -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Gly 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight42096.5
BranchedNumber of molecules1
Total formula weight546.5
Non-Polymers*Number of molecules4
Total formula weight1348.7
All*Total formula weight43991.7
*Water molecules are not included.

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PDB entries from 2026-01-21

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