4MWC
Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-(3-{[(2-methyl-1-benzothiophen-3-yl)methyl]amino}propyl)-3-thiophen-3-ylurea (Chem 1540)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | Methionyl-tRNA synthetase | polymer | 542 | 61434.7 | 2 | UniProt (Q38C91) Pfam (PF09334) Pfam (PF19303) | Trypanosoma brucei | |
2 | C, D, E, F, K... (A, B) | GLYCEROL | non-polymer | 92.1 | 6 | Chemie (GOL) | |||
3 | G, M (A, B) | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 2 | Chemie (DMS) | |||
4 | H, I, N, O (A, B) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
5 | J (A) | METHIONINE | non-polymer | 149.2 | 1 | Chemie (MET) | |||
6 | P (B) | 1-(3-{[(2-methyl-1-benzothiophen-3-yl)methyl]amino}propyl)-3-thiophen-3-ylurea | non-polymer | 359.5 | 1 | Chemie (2EM) | |||
7 | Q, R (A, B) | water | water | 18.0 | 322 | Chemie (HOH) |
Sequence modifications
A, B: 237 - 773 (UniProt: Q38C91)
PDB | External Database | Details |
---|---|---|
Gly -4 | - | expression tag |
Pro -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
Met 0 | - | expression tag |
Thr 309 | Ala 309 | conflict |
Ala 452 | Lys 452 | engineered mutation |
Arg 453 | Lys 453 | engineered mutation |
Ala 454 | Glu 454 | engineered mutation |
Val 499 | Ala 499 | conflict |
Asn 503 | Ser 503 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 122869.4 | |
Non-Polymers* | Number of molecules | 14 |
Total formula weight | 1601.8 | |
All* | Total formula weight | 124471.2 |