4L8D
Crystal structure of the H2Db in complex with the NP-N5D peptide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | H-2 class I histocompatibility antigen, D-B alpha chain | polymer | 280 | 32470.1 | 2 | UniProt (P01899) Pfam (PF00129) Pfam (PF07654) | Mus musculus (mouse) | heavy chain H2Db, H-2D(B) |
| 2 | B, D (B, D) | Beta-2-microglobulin | polymer | 99 | 11704.4 | 2 | UniProt (P01887) Pfam (PF07654) | Mus musculus (mouse) | b2m |
| 3 | E, F (E, F) | NP-N5D peptide | polymer | 9 | 1027.1 | 2 | |||
| 4 | G, H, I, J, K (A, C, D) | SULFATE ION | non-polymer | 96.1 | 5 | Chemie (SO4) | |||
| 5 | L, M, N, O, P... (A, B, C, D, E...) | water | water | 18.0 | 924 | Chemie (HOH) |
Sequence modifications
B, D: 1 - 99 (UniProt: P01887)
| PDB | External Database | Details |
|---|---|---|
| Asp 85 | Ala 105 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 90403.1 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 480.3 | |
| All* | Total formula weight | 90883.4 |
