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4L6D

Crystal structure of 5-carboxyvanillate decarboxylase from Sphingomonas paucimobilis complexed with vanillic acid

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...
(A, B, C, D, E...)
5-carboxyvanillate decarboxylasepolymer33537071.28UniProt (Q8RJ47)
Pfam (PF04909)
Sphingomonas paucimobilis
2CA, I, IA, MA, N...
(E, A, F, G, B...)
MANGANESE (II) IONnon-polymer54.99Chemie (MN)
3AA, DA, EA, FA, J...
(D, E, A, F, G...)
4-HYDROXY-3-METHOXYBENZOATEnon-polymer167.120Chemie (VNL)
4BA, GA, LA, M, QA...
(D, E, F, A, G...)
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDnon-polymer238.38Chemie (EPE)
5X
(C)
GLYCEROLnon-polymer92.11Chemie (GOL)
6HA
(E)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
7AB, BB, CB, VA, WA...
(F, G, H, A, B...)
waterwater18.03454Chemie (HOH)
Sequence modifications
A, B, C, D, E, F, G, H: 2 - 334 (UniProt: Q8RJ47)
PDBExternal DatabaseDetails
Ser 0-expression tag
Leu 1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight296569.6
Non-Polymers*Number of molecules39
Total formula weight5941.9
All*Total formula weight302511.5
*Water molecules are not included.

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PDB entries from 2025-07-23

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