4L02
Crystal Structure of SphK1 with inhibitor
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C (A, B, C) | Sphingosine kinase 1 | polymer | 384 | 42891.6 | 3 | UniProt (Q9NYA1) Pfam (PF00781) | Homo sapiens (human) | SK 1, SPK 1 |
2 | D, E, F (A, B, C) | (2R,4S)-1-[2-(4-{[4-(3,4-dichlorophenyl)-1,3-thiazol-2-yl]amino}phenyl)ethyl]-2-(hydroxymethyl)piperidin-4-ol | non-polymer | 478.4 | 3 | Chemie (1V2) | |||
3 | G, H, I (A, B, C) | water | water | 18.0 | 58 | Chemie (HOH) |
Sequence modifications
A, B, C: 9 - 364 (UniProt: Q9NYA1)
PDB | External Database | Details |
---|---|---|
Met -19 | - | expression tag |
Ser -18 | - | expression tag |
Tyr -17 | - | expression tag |
Tyr -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Asp -9 | - | expression tag |
Tyr -8 | - | expression tag |
Asp -7 | - | expression tag |
Ile -6 | - | expression tag |
Pro -5 | - | expression tag |
Thr -4 | - | expression tag |
Thr -3 | - | expression tag |
Glu -2 | - | expression tag |
Asn -1 | - | expression tag |
Leu 0 | - | expression tag |
Tyr 1 | - | expression tag |
Phe 2 | - | expression tag |
Gln 3 | - | expression tag |
Gly 4 | - | expression tag |
Ala 5 | - | expression tag |
Met 6 | - | expression tag |
Gly 7 | - | expression tag |
Ser 8 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 128674.9 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 1435.3 | |
All* | Total formula weight | 130110.2 |