4KVJ
Crystal structure of Oryza sativa fatty acid alpha-dioxygenase with hydrogen peroxide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Fatty acid alpha-oxidase | polymer | 621 | 70967.6 | 1 | UniProt (Q9M5J1) Pfam (PF03098) UniProt (by SIFTS) (Q2QRV3) In PDB | Oryza sativa (red rice) | |
| 2 | A | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 1 | Chemie (HEM) | |||
| 3 | A | DECYL-BETA-D-MALTOPYRANOSIDE | non-polymer | 482.6 | 1 | Chemie (DMU) | |||
| 4 | A | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 2 | Chemie (PG4) | |||
| 5 | A | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 7 | Chemie (PEG) | |||
| 6 | A | 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL | non-polymer | 326.4 | 1 | Chemie (P33) | |||
| 7 | A | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 8 | A | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 9 | A | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
| 10 | A | HYDROGEN PEROXIDE | non-polymer | 34.0 | 1 | Chemie (PEO) | |||
| 11 | A | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 12 | water | water | 18.0 | 332 | Chemie (HOH) |
Sequence modifications
A: 10 - 618 (UniProt: Q9M5J1)
| PDB | External Database | Details |
|---|---|---|
| Met -2 | - | expression tag |
| Arg -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Ser 1 | - | expression tag |
| His 2 | - | expression tag |
| His 3 | - | expression tag |
| His 4 | - | expression tag |
| His 5 | - | expression tag |
| His 6 | - | expression tag |
| His 7 | - | expression tag |
| Gly 8 | - | expression tag |
| Ser 9 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 70967.6 | |
| Non-Polymers* | Number of molecules | 21 |
| Total formula weight | 2968.8 | |
| All* | Total formula weight | 73936.4 |
