4KHY
Ternary complex of rb69 mutant L415F with ribonucleotide at -3 position
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | DNA polymerase | polymer | 903 | 104689.2 | 1 | UniProt (Q38087) Pfam (PF03104) Pfam (PF00136) | Enterobacteria phage RB69 | Gp43 |
| 2 | B (T) | DNA/RNA (5'-D(*AP*CP*AP*GP*G)-R(P*U)-D(P*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3') | polymer | 18 | 5552.6 | 1 | |||
| 3 | C (P) | DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*C)-3') | polymer | 14 | 4256.8 | 1 | |||
| 4 | D (A) | THYMIDINE-5'-TRIPHOSPHATE | non-polymer | 482.2 | 1 | Chemie (TTP) | |||
| 5 | E, F, G, H, L... (A) | CALCIUM ION | non-polymer | 40.1 | 6 | Chemie (CA) | |||
| 6 | I, J, K, N, O... (A) | SODIUM ION | non-polymer | 23.0 | 6 | Chemie (NA) | |||
| 7 | Q, R, S (A, T, P) | water | water | 18.0 | 480 | Chemie (HOH) |
Sequence modifications
A: 1 - 903 (UniProt: Q38087)
| PDB | External Database | Details |
|---|---|---|
| Ala 222 | Asp 222 | engineered mutation |
| Ala 327 | Asp 327 | engineered mutation |
| Phe 415 | Leu 415 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 114498.5 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 860.6 | |
| All* | Total formula weight | 115359.1 |
