4JV0
Ring-Opening of the -OH-PdG Adduct in Ternary Complexes with the Sulfolobus solfataricus DNA polymerase Dpo4
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | DNA polymerase IV | polymer | 347 | 39848.4 | 1 | UniProt (Q97W02) Pfam (PF00817) Pfam (PF11798) Pfam (PF11799) | Sulfolobus solfataricus | Pol IV |
2 | B (B) | DNA (5'-D(P*TP*(KAG)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') | polymer | 15 | 4551.0 | 1 | |||
3 | C (C) | DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*C)-3') | polymer | 14 | 4385.9 | 1 | |||
4 | D (A) | 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE | non-polymer | 491.2 | 1 | Chemie (DTP) | |||
5 | E, F (A) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
6 | G, H, I (A, B, C) | water | water | 18.0 | 44 | Chemie (HOH) |
Sequence modifications
A: 1 - 341 (UniProt: Q97W02)
PDB | External Database | Details |
---|---|---|
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 48785.3 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 571.3 | |
All* | Total formula weight | 49356.6 |