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4JV0

Ring-Opening of the -OH-PdG Adduct in Ternary Complexes with the Sulfolobus solfataricus DNA polymerase Dpo4

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase IVpolymer34739848.41UniProt (Q97W02)
Pfam (PF00817)
Pfam (PF11798)
Pfam (PF11799)
Sulfolobus solfataricusPol IV
2B
(B)
DNA (5'-D(P*TP*(KAG)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3')polymer154551.01
3C
(C)
DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*C)-3')polymer144385.91
4D
(A)
2'-DEOXYADENOSINE 5'-TRIPHOSPHATEnon-polymer491.21Chemie (DTP)
5E, F
(A)
CALCIUM IONnon-polymer40.12Chemie (CA)
6G, H, I
(A, B, C)
waterwater18.044Chemie (HOH)
Sequence modifications
A: 1 - 341 (UniProt: Q97W02)
PDBExternal DatabaseDetails
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight48785.3
Non-Polymers*Number of molecules3
Total formula weight571.3
All*Total formula weight49356.6
*Water molecules are not included.

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PDB entries from 2024-10-30

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