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4JPA

Mmp13 in complex with a piperazine hydantoin ligand

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Collagenase 3polymer17319495.72UniProt (P45452)
Pfam (PF00413)
Homo sapiensMatrix metalloproteinase-13, MMP-13
2C, E, I, J
(A, B)
ZINC IONnon-polymer65.44Chemie (ZN)
3D, F, K, L
(A, B)
CALCIUM IONnon-polymer40.14Chemie (CA)
4G, M
(A, B)
SODIUM IONnon-polymer23.02Chemie (NA)
5H, N
(A, B)
3-[({2-[4-({[(4S)-4-methyl-2,5-dioxoimidazolidin-4-yl]methyl}sulfonyl)piperazin-1-yl]pyrimidin-5-yl}oxy)methyl]benzonitrilenon-polymer485.52Chemie (AZ6)
6O, P
(A, B)
waterwater18.0373Chemie (HOH)
Sequence modifications
A, B: 103 - 274 (UniProt: P45452)
PDBExternal DatabaseDetails
Met 102-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight38991.4
Non-Polymers*Number of molecules12
Total formula weight1439.0
All*Total formula weight40430.3
*Water molecules are not included.

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PDB entries from 2024-11-13

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