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4JK2

X-ray crystal structure of Escherichia coli sigma70 holoenzyme in complex with guanosine pentaphosphate (pppGpp)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, F, GEscherichia coli RNA polymerase alpha subunitpolymer32936558.74UniProt (P0A7Z4)
Pfam (PF01193)
Pfam (PF01000)
Pfam (PF03118)
In PDB
Escherichia coliRNAP subunit alpha, RNA polymerase subunit alpha, Transcriptase subunit alpha
2C, HEscherichia coli RNA polymerase beta subunitpolymer1342150820.92UniProt (P0A8V2)
Pfam (PF04560)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF10385)
Pfam (PF00562)
In PDB
Escherichia coliRNAP subunit beta, RNA polymerase subunit beta, Transcriptase subunit beta
3D, IEscherichia coli RNA polymerase beta' subunitpolymer1407155366.82UniProt (P0A8T7)
Pfam (PF04997)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
In PDB
Escherichia coliRNAP subunit beta', RNA polymerase subunit beta', Transcriptase subunit beta'
4E, JEscherichia coli RNA polymerase omega subunitpolymer9110249.52UniProt (H0QDQ9)
Pfam (PF01192)
UniProt (by SIFTS) (P0A800)
In PDB
Escherichia coliRNAP omega subunit, RNA polymerase omega subunit, Transcriptase subunit omega
5X, YEscherichia coli RNA polymerase sigma70 subunitpolymer61370352.22UniProt (P00579)
Pfam (PF03979)
Pfam (PF00140)
Pfam (PF04546)
Pfam (PF04542)
Pfam (PF04539)
Pfam (PF04545)
In PDB
Escherichia coliSigma-70
6D, IZINC IONnon-polymer65.44Chemie (ZN)
7Dguanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)non-polymer683.11Chemie (0O2)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight919813.6
Non-Polymers*Number of molecules5
Total formula weight944.8
All*Total formula weight920758.4
*Water molecules are not included.

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PDB entries from 2024-10-09

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