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4ITC

Crystal Structure Analysis of the K1 Cleaved Adhesin domain of Lys-gingipain (Kgp) from Porphyromonas gingivalis W83

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Lys-gingipain W83polymer17318549.41UniProt (Q51817)
Pfam (PF07675)
Porphyromonas gingivalisLysine specific cysteine protease, Lysine-specific cysteine proteinase, Porphypain, PrtK48, Lys-gingipain catalytic subunit, 39 kDa adhesin, PrtK39, 15 kDa adhesin, PrtK15, 44 kDa adhesin, PrtK44
2B, C
(A)
CALCIUM IONnon-polymer40.12Chemie (CA)
3D, E, G
(A)
GUANIDINEnon-polymer59.13Chemie (GAI)
4F, H
(A)
GLYCEROLnon-polymer92.12Chemie (GOL)
5I
(A)
waterwater18.0123Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight18549.4
Non-Polymers*Number of molecules7
Total formula weight441.6
All*Total formula weight18991.0
*Water molecules are not included.

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PDB entries from 2025-06-18

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