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4IKT

Crystal structure of truncated (delta 1-89) human methionine aminopeptidase Type 1 in complex with N1-(5-chloro-6-methyl-2-(pyridin-2-yl)pyrimidin-4-yl)-N2-(5-(trifluoromethyl)pyridin-2-yl)ethane-1,2-diamine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Methionine aminopeptidase 1polymer32936935.91UniProt (P53582)
Pfam (PF00557)
Homo sapiens (human)MAP 1, MetAP 1, Peptidase M 1
2B
(A)
N-[5-chloro-6-methyl-2-(pyridin-2-yl)pyrimidin-4-yl]-N'-[5-(trifluoromethyl)pyridin-2-yl]ethane-1,2-diaminenon-polymer408.81Chemie (TFV)
3C, D, E
(A)
COBALT (II) IONnon-polymer58.93Chemie (CO)
4F
(A)
POTASSIUM IONnon-polymer39.11Chemie (K)
5G
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
6H
(A)
waterwater18.0135Chemie (HOH)
Sequence modifications
A: 90 - 393 (UniProt: P53582)
PDBExternal DatabaseDetails
Met 65-expression tag
Gly 66-expression tag
Ser 67-expression tag
Ser 68-expression tag
His 69-expression tag
His 70-expression tag
His 71-expression tag
His 72-expression tag
His 73-expression tag
His 74-expression tag
Ser 75-expression tag
Ser 76-expression tag
Gly 77-expression tag
Leu 78-expression tag
Val 79-expression tag
Pro 80-expression tag
Arg 81-expression tag
Gly 82-expression tag
Ser 83-expression tag
His 84-expression tag
Met 85-expression tag
Leu 86-expression tag
Glu 87-expression tag
Asp 88-expression tag
Pro 89-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight36935.9
Non-Polymers*Number of molecules6
Total formula weight716.8
All*Total formula weight37652.7
*Water molecules are not included.

238582

PDB entries from 2025-07-09

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