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4HSU

Crystal structure of LSD2-NPAC with H3(1-26)in space group P21

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Lysine-specific histone demethylase 1Bpolymer77687051.51UniProt (Q8NB78)
Pfam (PF07496)
Pfam (PF04433)
Pfam (PF01593)
Homo sapiens (human)LSD2, Flavin-containing amine oxidase domain-containing protein 1, Lysine-specific histone demethylase 2
2B
(B)
Putative oxidoreductase GLYR1polymer12413528.31UniProt (Q49A26)Homo sapiens (human)NPAC, 3-hydroxyisobutyrate dehydrogenase-like protein, Cytokine-like nuclear factor N-PAC, Glyoxylate reductase 1 homolog, Nuclear protein NP60, Nuclear protein of 60 kDa
3C
(C)
Histone H3polymer303177.81UniProt (Q92133)Xenopus laevis
4D
(A)
FLAVIN-ADENINE DINUCLEOTIDEnon-polymer785.51Chemie (FAD)
5E, F, G
(A)
ZINC IONnon-polymer65.43Chemie (ZN)
6H, I, J
(A, B, C)
waterwater18.0314Chemie (HOH)
Sequence modifications
A: 51 - 822 (UniProt: Q8NB78)
PDBExternal DatabaseDetails
Pro 47-expression tag
Leu 48-expression tag
Gly 49-expression tag
Ser 50-expression tag
B: 152 - 268 (UniProt: Q49A26)
PDBExternal DatabaseDetails
Pro 145-expression tag
Leu 146-expression tag
Gly 147-expression tag
Ser 148-expression tag
Pro 149-expression tag
Glu 150-expression tag
Phe 151-expression tag
C: 1 - 30 (UniProt: Q92133)
PDBExternal DatabaseDetails
Met 4Lys 5engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight103757.6
Non-Polymers*Number of molecules4
Total formula weight981.8
All*Total formula weight104739.3
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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