4HJF
EAL domain of phosphodiesterase PdeA in complex with c-di-GMP and Ca++
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | GGDEF family protein | polymer | 340 | 36780.8 | 1 | UniProt (Q9A310) Pfam (PF00563) | Caulobacter crescentus | |
| 2 | B, C (A) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 3 | D (A) | 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) | non-polymer | 690.4 | 1 | Chemie (C2E) | |||
| 4 | E (A) | water | water | 18.0 | 212 | Chemie (HOH) |
Sequence modifications
A: 240 - 555 (UniProt: Q9A310)
| PDB | External Database | Details |
|---|---|---|
| Mse 216 | - | expression tag |
| His 217 | - | expression tag |
| His 218 | - | expression tag |
| His 219 | - | expression tag |
| His 220 | - | expression tag |
| His 221 | - | expression tag |
| His 222 | - | expression tag |
| Ser 223 | - | expression tag |
| Ser 224 | - | expression tag |
| Gly 225 | - | expression tag |
| Val 226 | - | expression tag |
| Asp 227 | - | expression tag |
| Leu 228 | - | expression tag |
| Gly 229 | - | expression tag |
| Thr 230 | - | expression tag |
| Glu 231 | - | expression tag |
| Asn 232 | - | expression tag |
| Leu 233 | - | expression tag |
| Tyr 234 | - | expression tag |
| Phe 235 | - | expression tag |
| Gln 236 | - | expression tag |
| Ser 237 | - | expression tag |
| Asn 238 | - | expression tag |
| Ala 239 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 36780.8 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 770.6 | |
| All* | Total formula weight | 37551.3 |
