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4HAY

Crystal structure of CRM1 inhibitor Leptomycin B in complex with CRM1(K548E,K579Q)-Ran-RanBP1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AGTP-binding nuclear protein Ranpolymer21624456.11UniProt (P62826)
Pfam (PF00071)
In PDB
Homo sapiens (human)Androgen receptor-associated protein 24, GTPase Ran, Ras-like protein TC4, Ras-related nuclear protein
2BRan-specific GTPase-activating protein 1polymer14016378.81UniProt (P41920)
Pfam (PF00638)
In PDB
Saccharomyces cerevisiae (yeast)Chromosome stability protein 20, Perinuclear array-localized protein, Ran-binding protein 1, RANBP1
3CExportin-1polymer1023117397.81UniProt (P30822)
Pfam (PF03810)
Pfam (PF08389)
Pfam (PF18777)
Pfam (PF18784)
Pfam (PF18787)
Pfam (PF08767)
In PDB
Saccharomyces cerevisiae (yeast)CRM1, Chromosome region maintenance protein 1, Karyopherin-124
4APHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERnon-polymer522.21Chemie (GNP)
5AMAGNESIUM IONnon-polymer24.31Chemie (MG)
6A, C1,2-ETHANEDIOLnon-polymer62.15Chemie (EDO)
7CLeptomycin B, bound formnon-polymer560.81Chemie (LMB)
8CCHLORIDE IONnon-polymer35.53Chemie (CL)
9waterwater18.0628Chemie (HOH)
Sequence modifications
B: 62 - 201 (UniProt: P41920)
PDBExternal DatabaseDetails
Lys 98Ala 98CONFLICT
C: 1 - 376 (UniProt: P30822)
PDBExternal DatabaseDetails
Gly -1-EXPRESSION TAG
Ala 0-EXPRESSION TAG
C: 414 - 1058 (UniProt: P30822)
PDBExternal DatabaseDetails
Cys 539Thr 539ENGINEERED MUTATION
Glu 548Lys 548ENGINEERED MUTATION
Gln 579Lys 579ENGINEERED MUTATION
Cys 1022Tyr 1022ENGINEERED MUTATION
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight158232.6
Non-Polymers*Number of molecules11
Total formula weight1524.0
All*Total formula weight159756.6
*Water molecules are not included.

222926

PDB entries from 2024-07-24

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