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4HAW

Crystal structure of CRM1 inhibitor Leptomycin B in complex with CRM1(K548A)-Ran-RanBP1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AGTP-binding nuclear protein Ranpolymer21624456.11UniProt (P62826)
Pfam (PF00071)
In PDB
Homo sapiens (human)Androgen receptor-associated protein 24, GTPase Ran, Ras-like protein TC4, Ras-related nuclear protein
2BRan-specific GTPase-activating protein 1polymer14016378.81UniProt (P41920)
Pfam (PF00638)
In PDB
Saccharomyces cerevisiae (yeast)Chromosome stability protein 20, Perinuclear array-localized protein, Ran-binding protein 1, RANBP1
3CExportin-1polymer1023117340.81UniProt (P30822)
Pfam (PF03810)
Pfam (PF08389)
Pfam (PF18777)
Pfam (PF18784)
Pfam (PF18787)
Pfam (PF08767)
In PDB
Saccharomyces cerevisiae (yeast)CRM1, Chromosome region maintenance protein 1, Karyopherin-124
4APHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERnon-polymer522.21Chemie (GNP)
5A, CMAGNESIUM IONnon-polymer24.32Chemie (MG)
6A, CGLYCEROLnon-polymer92.13Chemie (GOL)
7A, C1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
8CLeptomycin B, bound formnon-polymer560.81Chemie (LMB)
9CCHLORIDE IONnon-polymer35.53Chemie (CL)
10waterwater18.01214Chemie (HOH)
Sequence modifications
B: 62 - 201 (UniProt: P41920)
PDBExternal DatabaseDetails
Lys 98Ala 98CONFLICT
C: 1 - 376 (UniProt: P30822)
PDBExternal DatabaseDetails
Gly -1-EXPRESSION TAG
Ala 0-EXPRESSION TAG
C: 414 - 1058 (UniProt: P30822)
PDBExternal DatabaseDetails
Cys 539Thr 539ENGINEERED MUTATION
Ala 548Lys 548ENGINEERED MUTATION
Cys 1022Tyr 1022ENGINEERED MUTATION
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight158175.7
Non-Polymers*Number of molecules12
Total formula weight1638.3
All*Total formula weight159814.0
*Water molecules are not included.

222926

PDB entries from 2024-07-24

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