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4HAU

Crystal structure of CRM1 inhibitor Ratjadone A in complex with CRM1-Ran-RanBP1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AGTP-binding nuclear protein Ranpolymer21624456.11UniProt (P62826)
Pfam (PF00071)
In PDB
Homo sapiens (human)Androgen receptor-associated protein 24, GTPase Ran, Ras-like protein TC4, Ras-related nuclear protein
2BRan-specific GTPase-activating protein 1polymer14016378.81UniProt (P41920)
Pfam (PF00638)
In PDB
Saccharomyces cerevisiae (yeast)Chromosome stability protein 20, Perinuclear array-localized protein, Ran-binding protein 1, RANBP1
3CExportin-1polymer1023117382.91UniProt (P30822)
Pfam (PF03810)
Pfam (PF08389)
Pfam (PF18777)
Pfam (PF18784)
Pfam (PF18787)
Pfam (PF08767)
In PDB
Saccharomyces cerevisiae (yeast)CRM1, Chromosome region maintenance protein 1, Karyopherin-124
4APHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERnon-polymer522.21Chemie (GNP)
5AMAGNESIUM IONnon-polymer24.31Chemie (MG)
6A, C1,2-ETHANEDIOLnon-polymer62.14Chemie (EDO)
7CRatjadone A, bound formnon-polymer476.61Chemie (RJA)
8CGLYCEROLnon-polymer92.13Chemie (GOL)
9CCHLORIDE IONnon-polymer35.53Chemie (CL)
10waterwater18.01340Chemie (HOH)
Sequence modifications
B: 62 - 201 (UniProt: P41920)
PDBExternal DatabaseDetails
Lys 98Ala 98CONFLICT
C: 1 - 376 (UniProt: P30822)
PDBExternal DatabaseDetails
Gly -1-EXPRESSION TAG
Ala 0-EXPRESSION TAG
Ala 205Ser 205CONFLICT
C: 414 - 1058 (UniProt: P30822)
PDBExternal DatabaseDetails
Cys 539Thr 539ENGINEERED MUTATION
Cys 1022Tyr 1022ENGINEERED MUTATION
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight158217.8
Non-Polymers*Number of molecules13
Total formula weight1654.1
All*Total formula weight159871.8
*Water molecules are not included.

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PDB entries from 2024-04-24

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