4GZ1
Mus Musculus Tdp2 reaction product (5'-phosphorylated DNA)-Mg2+ complex at 1.5 Angstroms resolution
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Tyrosyl-DNA phosphodiesterase 2 | polymer | 256 | 28890.2 | 2 | UniProt (Q9JJX7) Pfam (PF03372) | Mus musculus (mouse) | Tyr-DNA phosphodiesterase 2, 5'-tyrosyl-DNA phosphodiesterase, 5'-Tyr-DNA phosphodiesterase, TRAF and TNF receptor-associated protein |
| 2 | C, D (C, D) | DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') | polymer | 9 | 2715.8 | 2 | |||
| 3 | E (A) | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 1 | Chemie (EPE) | |||
| 4 | F, H (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 5 | G (B) | FORMIC ACID | non-polymer | 46.0 | 1 | Chemie (FMT) | |||
| 6 | I, J, K, L (A, B, C, D) | water | water | 18.0 | 469 | Chemie (HOH) |
Sequence modifications
A, B: 118 - 370 (UniProt: Q9JJX7)
| PDB | External Database | Details |
|---|---|---|
| Ser 115 | - | expression tag |
| Asn 116 | - | expression tag |
| Gly 117 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 63211.9 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 332.9 | |
| All* | Total formula weight | 63544.8 |
