4GDK
Crystal Structure of Human Atg12~Atg5 Conjugate in Complex with an N-terminal Fragment of Atg16L1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D (A, D) | Ubiquitin-like protein ATG12 | polymer | 91 | 10282.0 | 2 | UniProt (O94817) Pfam (PF04110) | Homo sapiens (human) | Autophagy-related protein 12, APG12-like |
| 2 | B, E (B, E) | Autophagy protein 5 | polymer | 275 | 32489.2 | 2 | UniProt (Q9H1Y0) Pfam (PF20638) Pfam (PF20637) Pfam (PF04106) | Homo sapiens (human) | APG5-like, Apoptosis-specific protein |
| 3 | C, F (C, F) | Autophagy-related protein 16-1 | polymer | 36 | 4657.4 | 2 | UniProt (Q676U5) | Homo sapiens (human) | APG16-like 1 |
| 4 | G, H (B, E) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 5 | I, J, K, L, M... (A, B, C, D, E...) | water | water | 18.0 | 76 | Chemie (HOH) |
Sequence modifications
A, D: 52 - 140 (UniProt: O94817)
C, F: 11 - 43 (UniProt: Q676U5)
| PDB | External Database | Details |
|---|---|---|
| Gly 50 | - | expression tag |
| Ser 51 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ser 8 | - | expression tag |
| His 9 | - | expression tag |
| Met 10 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 94857.3 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 46.0 | |
| All* | Total formula weight | 94903.3 |
