4FPV
Crystal structure of D. rerio TDP2 complexed with single strand DNA product
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Tyrosyl-DNA phosphodiesterase 2 | polymer | 257 | 29230.5 | 2 | UniProt (Q5XJA0) Pfam (PF03372) In PDB | Danio rerio (leopard danio zebra danio zebra fish) | Tyr-DNA phosphodiesterase 2, 5'-tyrosyl-DNA phosphodiesterase, 5'-Tyr-DNA phosphodiesterase, TRAF and TNF receptor-associated protein homolog |
| 2 | C | DNA (5'-D(P*TP*GP*CP*AP*G)-3') | polymer | 5 | 1520.0 | 1 | Danio rerio | ||
| 3 | A, B | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 4 | A, B | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 5 | B, C | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 6 | water | water | 18.0 | 496 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 59981.1 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 370.9 | |
| All* | Total formula weight | 60351.9 |
