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4F9C

Human CDC7 kinase in complex with DBF4 and XL413

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Cell division cycle 7-related protein kinasepolymer36140633.81UniProt (O00311)
Pfam (PF00069)
Homo sapiens (human)CDC7-related kinase, HsCdc7, huCdc7
2B
(B)
Protein DBF4 homolog Apolymer14416923.41UniProt (Q9UBU7)
Pfam (PF07535)
Homo sapiens (human)Activator of S phase kinase, Chiffon homolog A, DBF4-type zinc finger-containing protein 1
3C
(A)
8-chloro-2-[(2S)-pyrrolidin-2-yl][1]benzofuro[3,2-d]pyrimidin-4(3H)-onenon-polymer289.71Chemie (0SX)
4D
(B)
ZINC IONnon-polymer65.41Chemie (ZN)
5E, F
(A, B)
waterwater18.081Chemie (HOH)
Sequence modifications
A: 37 - 359 (UniProt: O00311)
PDBExternal DatabaseDetails
Met 36-expression tag
A: 360 - 529 (UniProt: O00311)
A: 530 - 574 (UniProt: O00311)
B: 210 - 350 (UniProt: Q9UBU7)
PDBExternal DatabaseDetails
Gly 207-expression tag
Pro 208-expression tag
Gly 209-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight57557.2
Non-Polymers*Number of molecules2
Total formula weight355.1
All*Total formula weight57912.4
*Water molecules are not included.

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PDB entries from 2025-06-18

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