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4F5P

Open ternary mismatch complex of R283K DNA polymerase beta with a dATP analog

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase betapolymer33538213.71UniProt (P06746)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
Homo sapiens (human)
2B
(T)
DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')polymer164869.21synthetic construct
3C
(P)
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3')polymer103061.01synthetic construct
4D
(D)
DNA (5'-D(P*GP*TP*CP*GP*G)-3')polymer51536.01synthetic construct
5E
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
6F, G
(A)
SODIUM IONnon-polymer23.02Chemie (NA)
7H
(A)
2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]adenosinenon-polymer489.21Chemie (F2A)
8I, J, K, L
(A, T, P, D)
waterwater18.0292Chemie (HOH)
Sequence modifications
A: 1 - 335 (UniProt: P06746)
PDBExternal DatabaseDetails
Lys 283Arg 283engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight47679.9
Non-Polymers*Number of molecules4
Total formula weight559.5
All*Total formula weight48239.3
*Water molecules are not included.

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PDB entries from 2025-06-11

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