4EW4
mouse MBD4 glycosylase domain in complex with DNA containing a ribose sugar
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Methyl-CpG-binding domain protein 4 | polymer | 146 | 17564.2 | 1 | UniProt (Q9Z2D7) | Mus musculus (Mouse) | Methyl-CpG-binding protein MBD4,Mismatch-specific DNA N-glycosylase |
| 2 | B (B) | DNA (5'-D(*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3') | polymer | 11 | 3374.2 | 1 | synthetic construct | ||
| 3 | C (C) | DNA (5'-D(*CP*CP*AP*TP*GP*(3DR)P*GP*CP*TP*GP*A)-3') | polymer | 11 | 3225.1 | 1 | synthetic construct | ||
| 4 | D (A) | NICKEL (II) ION | non-polymer | 58.7 | 1 | Chemie (NI) | |||
| 5 | E (A) | UNKNOWN ATOM OR ION | non-polymer | 103.1 | 1 | Chemie (UNX) | |||
| 6 | F, G, H (A, B, C) | water | water | 18.0 | 18 | Chemie (HOH) |
Sequence modifications
A: 411 - 554 (UniProt: Q9Z2D7)
| PDB | External Database | Details |
|---|---|---|
| His 409 | - | expression tag |
| Met 410 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 24163.5 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 161.8 | |
| All* | Total formula weight | 24325.3 |
