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4EDY

Crystal structure of hH-PGDS with water displacing inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Hematopoietic prostaglandin D synthasepolymer19923377.82UniProt (O60760)
Pfam (PF02798)
Pfam (PF14497)
Homo sapiens (human)H-PGDS, GST class-sigma, Glutathione S-transferase, Glutathione-dependent PGD synthase, Glutathione-requiring prostaglandin D synthase, Prostaglandin-H2 D-isomerase
2C
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
3D, G
(A, B)
GLUTATHIONEnon-polymer307.32Chemie (GSH)
4E
(A)
4-[2-(hydroxymethyl)naphthalen-1-yl]-N-[2-(morpholin-4-yl)ethyl]benzamidenon-polymer390.51Chemie (9PQ)
5F
(B)
DIMETHYL SULFOXIDEnon-polymer78.11Chemie (DMS)
6H, I
(A, B)
waterwater18.0684Chemie (HOH)
Sequence modifications
A, B: 2 - 199 (UniProt: O60760)
PDBExternal DatabaseDetails
His 1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight46755.6
Non-Polymers*Number of molecules5
Total formula weight1107.6
All*Total formula weight47863.1
*Water molecules are not included.

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PDB entries from 2025-12-17

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